ggKbase home page

L3_105_000G1_scaffold_514_22

Organism: L3_105_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 33309..33875

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y7A6_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 188.0
  • Bit_score: 375
  • Evalue 1.60e-101
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN09092.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 188.0
  • Bit_score: 375
  • Evalue 2.20e-101
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 179.0
  • Bit_score: 258
  • Evalue 1.10e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides merdae → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGGAATATTCAGCAGATTTAAAGGCCTTCAATCAATTATTCGCAGATTATCAAGGACGGTTCATCCGCTTTGCGAATATATATGTGAGGGATATAGCTGTTGCCGAAGATTTCACTATAGAAGCGCTGATGCAATACTGGGAAAACCGGAACACGCTGAAGGCCGATTCCAATGTTCCGGCCTATATACTCACGATCATCAAAAACAAATGTATCAACTACCTGCAACATATACAAGTCAGGGAAGATGCCAGCGAACATCTGAAGAATCATGCCGAATGGGAACTGAATACCCGCATCTCCACCCTCGAAGCCTGCAACCCGGAAGAACTGTTTACAGCCGAAGCACAAGAAATCGTGAACAAGACATTGGCCTCCCTGCCGGAACAGACCCGCCGTATCTTCATCATAAGTCGCTACGAAAACAAACCTTACAAAGAGATCGCAGAAACACTCGGTATGACAACCAAAGGCGTGGAATACCATATATCCCAGGCCCTGAAAAAGCTACATGCCAATCTGAAAGACTACATACCTCTATTGGTATTCTTATCCTATATGAACTGA
PROTEIN sequence
Length: 189
MEYSADLKAFNQLFADYQGRFIRFANIYVRDIAVAEDFTIEALMQYWENRNTLKADSNVPAYILTIIKNKCINYLQHIQVREDASEHLKNHAEWELNTRISTLEACNPEELFTAEAQEIVNKTLASLPEQTRRIFIISRYENKPYKEIAETLGMTTKGVEYHISQALKKLHANLKDYIPLLVFLSYMN*