ggKbase home page

L3_105_245G1_scaffold_513_5

Organism: L3_105_245G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(3792..5252)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQK7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 484.0
  • Bit_score: 525
  • Evalue 5.50e-146
Uncharacterized protein {ECO:0000313|EMBL:KGF56976.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 484.0
  • Bit_score: 525
  • Evalue 5.90e-146
Fis family PAS modulated sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 465.0
  • Bit_score: 363
  • Evalue 6.00e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavonifractor plautii → Flavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1461
ATGGATAAATCCCAATTTGACCGGCTGGTGGAGAGCGGCGTGCTGGACCAGATCCTGGACACCTCCTACGACGGCTTCACATATACCGATGAGACGGGAACCATCGCCTATGTGAATCGGGCCTACTGCGAGATGACCGGATTCTCTGAAGAGAGTATTTTGGGCCGAAACATTTTTGAATTGATCCAAATTGGCCGTCCTCTTGCCCGGATGTCCATCAAAGTGTTCGAGACAAGGCAACCCATCACAGAGCTGGTGCGCTACCGGGCGGACACCAATCAGGAGATCATGGTCACGGTCCTCCCCTTCTACGAAAAGGGGACGGACACCTTCCGGGGCATCGTGGCCAACCTGCGGGACATGACCGACCTGACCGAGCTGCGGCGGGAACTGGAGCTGAGCTACCTGCGCTACGACGAGGTGGTCAAGCAGCACGAGGAGGCCAGCCAGAAGCTCCACCAGCGTCTGGAGGAGCTGCAGGTGATGTTGAAAGATTGCGACATTGTGGGGGAAAGCCGACAGATGCGGGGGCTGGCGGAGCTGGCCTACCGCATCGGCAGCGTCCAGTCCACCGTCCTCATCACCGGTGAGTCGGGGGTGGGCAAGGACGTGTTCTGCCGCATGGTTCACAAGTTCTCCGGCCCGGACAAACCCTTTATAAAGATCTCCTGCGGAGCCATCCCGGACAATCTGCTGGAGTCGGAACTCTTCGGCTACGAGGCGGGAGCCTTCACCGGAGCCAACAAGCACGGCAAGCCGGGCATCTTTGAGCTGGGCGACGGGGGCACCGTGTTCCTGGACGAGATCGGAGAGCTTCCCCTTCAGCTCCAGGTAAAGCTGCTTACCGTGCTCCAGGACCGGACCTTCTTCCGGCTGGGGGGCGTCAAGGCGCTGCCCATGAACGCCCGCATCATCGCCGCCACCAACCGGGATCTGAAGGAGGAGGTGGCCGCTGGCCGCTTCCGTCAGGACCTGTACTACCGGCTCAACGTGATCCCGGTGCACATCCCGCCCCTGCGGGAGCGGAAGGAGGACATCATTCCCCTGGCGGCCCACGCTTTGGAGCGGCTGGCTCACACCAACGGGGGGCGCAAGGTGCTGGACGTACGGGTACAGCGCCTCTTTACCAACTACGCCTGGCCGGGCAATGTACGGGAGCTGAACAACGTGGTGGAGCGGATGTATGTCTTTTGTCCCGGAGACGTGCTCACCGTGGACTATCTGCCCCGGGAGCTGGCCGGAGCGTCCGAGCCGACGGTGAACCTGGACAGCGCCCACACCCTGAAGGAGACCATGGAGCGGCTGGAGGCCAGTGTGCTGCTCAGCCATCTGGACGAGGAGCGCACCCTCAGCGAGATCGCCGCCGGGCTGGGCATCAGCGTGTCCACCCTCATCCGCAAGCTGAGCCGGTACCATCTCCCCCGCCGCTACCGCAGGAGCGACCGGGAGGACGGAACCTGA
PROTEIN sequence
Length: 487
MDKSQFDRLVESGVLDQILDTSYDGFTYTDETGTIAYVNRAYCEMTGFSEESILGRNIFELIQIGRPLARMSIKVFETRQPITELVRYRADTNQEIMVTVLPFYEKGTDTFRGIVANLRDMTDLTELRRELELSYLRYDEVVKQHEEASQKLHQRLEELQVMLKDCDIVGESRQMRGLAELAYRIGSVQSTVLITGESGVGKDVFCRMVHKFSGPDKPFIKISCGAIPDNLLESELFGYEAGAFTGANKHGKPGIFELGDGGTVFLDEIGELPLQLQVKLLTVLQDRTFFRLGGVKALPMNARIIAATNRDLKEEVAAGRFRQDLYYRLNVIPVHIPPLRERKEDIIPLAAHALERLAHTNGGRKVLDVRVQRLFTNYAWPGNVRELNNVVERMYVFCPGDVLTVDYLPRELAGASEPTVNLDSAHTLKETMERLEASVLLSHLDEERTLSEIAAGLGISVSTLIRKLSRYHLPRRYRRSDREDGT*