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L3_108_039G1_scaffold_2_3

Organism: L3_108_039G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 2628..3335

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium RepID=A6LSH2_CLOB8 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 235.0
  • Bit_score: 403
  • Evalue 1.20e-109
sigE; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 457
  • Evalue 1.50e-126
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 457
  • Evalue 7.30e-126

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 708
ATGTTAAAAATACAGGTATTATTAAATAGTATATTAGAAAAACTAGGATTGTTTAGAAAGAAGCTTCATTATGTAGGAGGAAGTGATGCACTTCCTCCACCGCTTGCAAAAGATGAAGAAGAAGATTTAGTGAATAAATTAAGAAATGGTGATGAAAAAGTAAGAAGTACTTTAATAGAAAGAAATTTAAGGTTAGTTGTATATATAGCAAGAAAATTTGAAAATACAGGAGTTTATGTAGAGGATTTAATATCTGTTGGAACAATAGGACTTATAAAAGCTGTAAATACATTTAATCCTGAAAAGCAAATAAAACTTGCAACTTACGCATCAAGATGTATAGAAAATGAAATTTTAATGTATTTAAGAAGAAATAATAAAATAAAAGCAGAAATATCATTTTATGAACCACTTAATATAGACTGGGATGGAAATGAACTTCTTTTATCAGATATATTAGGAACTGAAAATGATACTGTGTACAATTTAATTGAAGATGAGGTTGACAAGCAACTTTTATTTATAGCTCTTAAAAATTTAAATGATAGAGAAAAAGAAATTGTTGAATTAAGATTTGGTCTAAATGGATGTAATGAAAAGACTCAGAAAGAAGTAGCTGACATACTTGGCATATCACAATCGTATATTTCAAGACTTGAGAAAAAAATAATAAATAGATTAAAAAAAGAAATAAGTAAAATGGTTTAG
PROTEIN sequence
Length: 236
MLKIQVLLNSILEKLGLFRKKLHYVGGSDALPPPLAKDEEEDLVNKLRNGDEKVRSTLIERNLRLVVYIARKFENTGVYVEDLISVGTIGLIKAVNTFNPEKQIKLATYASRCIENEILMYLRRNNKIKAEISFYEPLNIDWDGNELLLSDILGTENDTVYNLIEDEVDKQLLFIALKNLNDREKEIVELRFGLNGCNEKTQKEVADILGISQSYISRLEKKIINRLKKEISKMV*