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L3_108_365G1_scaffold_1319_20

Organism: L3_108_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(16216..17967)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 components n=16 Tax=root RepID=D4K4R2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 583.0
  • Bit_score: 1167
  • Evalue 0.0
Type IV secretory pathway, VirD4 components similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 583.0
  • Bit_score: 1167
  • Evalue 0.0
TraG/TraD family protein {ECO:0000313|EMBL:ERI76405.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 583.0
  • Bit_score: 1167
  • Evalue 0.0

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Taxonomy

Clostridium sp. ATCC BAA-442 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1752
ATGGATAAGAGAAAAATGAAAAAGCTCCTGATTCTGAATTTACCGTATTTTCTGGTAGGGTTGTTCGCTACGAATTTAGGAGAAGCATGGAGATTGGCTGAGGGGGCAGATTCATCTGCGAAAATCCTCAGCTTTTTTCATGCCCTTCCGATAGCCCTGAACAATCCGTTTCCCAGCTTTCACCCGTTGGATTTGCTGATTGGTATTCTCTGCGGCGCAGGACTTCGGCTGGCTGTCTATCTAAAAGGCAAAAACGCAAAGAAGTACCGACACAATGTTGAGTACGGTTCTGCTCGTTGGGGAACGGCAAAAGATATTGAGCCGTTTATTGCACCAAAGTTCGAGGACAATGTGATCCTGACGAAAACGGAGCGGCTGATGATGAGCAATCGCCCGAAGAATCCTGCCAATGCCCGAAATAAGAATGTTCTGATTATCGGCGGTTCGGGTTCCGGTAAAACTCGCTTTTGGTTGAAGCCAAACCTTCTCCAGATGCACAGTTCCTATGTGGTCACTGACCCGAAAGGCAGCATCGTGATTGAGTGCGGCAACGCCCTTTTGAAGCATGGCTACACCATCAAGATTTTCAACACCATCAACTTTCAGAAGTCGATGCACTATAACCCATTTGCCTATATCCATTCAGAAAAAGACATTCTGAAACTGGTGACAACGCTGATTGCCAACACAAAGGGTGATGGAAAAGCCGGTGATGAGTTCTGGACGAAGGCGGAAACGCTGCTCTACTGTGCCTTGATCGGATATATCCACTATGAAGCTCCGGTTGAGGAACAGAATTTCTCCACCCTGATTGAGTTCCTGAACGCAATGGAGGTGCGGGAAGATGATGAGGAGTTCCAGAACCCGGTGGATCTGATGTTTGAAGCCCTGGAAAAGAAAAAGCCGAATCACTTTGCAGTCCGTCAGTATAAAAAATACAAGCTGGCTGCCGGCAAGACCGCTAAGTCGATTTTGATTTCCTGCGGCGCTCGTCTGGCTCCTTTTGATATTCAGGAGGTCAGAGATGTGACTGCCTATGACGAGTTGCAGTTGGATACTCTCGGAGATAAGAAAACGGCGCTCTTTCTGATTATGTCAGATACGGATGCGACGTTTAATTTTTTGATCTCCATGATTTACACACAGCTGTTCAACTTGTTGTGCGAGAAAGCAGATGATGTGTACGGCGGCAGACTGCCGGTTCATGTGCGCTGCTTGATTGATGAGATGGCAAACATCGGTCAGATTCCCAATCTGGAAAAACTGGTAGCGACAATCCGAAGCCGTGAAATATCGGCTTGCCTTGTTCTCCAGGCACAATCACAGCTGAAAGCCATTTATAAAGACAATGCCGATACCATCATCGGCAACATGGATTCCCGAATTTTCCTGGGTGGTTCTGAGCCAACCACGCTCAAAGAACTGAATCAGGCATTGGGAAAAGAAACTATCGACACCTACAACACCTCCAACACCAGAGGTAACAGCCCGTCTTACGGCTTGAATTATCAGAAGTTAGGCAAAGACCTTGCGAGCGTAGATGAGCTTGCGGTTCTGGATGGCAGCAAGTGTATTTTGCAGTTGCGTGGTGTCAGACCGTTTCTTTCTGACAAGTACGATCTGACGCAGCACCCCAATTATAAGTACACATCAGACTTTGATAAGAGAAATGAGTTCAACATTGAGCAGTTTCTGAGTCGAAGGTTGAAGCTCAAGGCAGGTGATGAGTTTGTGGTAGTCGATGCGGATTAA
PROTEIN sequence
Length: 584
MDKRKMKKLLILNLPYFLVGLFATNLGEAWRLAEGADSSAKILSFFHALPIALNNPFPSFHPLDLLIGILCGAGLRLAVYLKGKNAKKYRHNVEYGSARWGTAKDIEPFIAPKFEDNVILTKTERLMMSNRPKNPANARNKNVLIIGGSGSGKTRFWLKPNLLQMHSSYVVTDPKGSIVIECGNALLKHGYTIKIFNTINFQKSMHYNPFAYIHSEKDILKLVTTLIANTKGDGKAGDEFWTKAETLLYCALIGYIHYEAPVEEQNFSTLIEFLNAMEVREDDEEFQNPVDLMFEALEKKKPNHFAVRQYKKYKLAAGKTAKSILISCGARLAPFDIQEVRDVTAYDELQLDTLGDKKTALFLIMSDTDATFNFLISMIYTQLFNLLCEKADDVYGGRLPVHVRCLIDEMANIGQIPNLEKLVATIRSREISACLVLQAQSQLKAIYKDNADTIIGNMDSRIFLGGSEPTTLKELNQALGKETIDTYNTSNTRGNSPSYGLNYQKLGKDLASVDELAVLDGSKCILQLRGVRPFLSDKYDLTQHPNYKYTSDFDKRNEFNIEQFLSRRLKLKAGDEFVVVDAD*