ggKbase home page

L3_108_365G1_scaffold_243_11

Organism: L3_108_365G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(8203..8724)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKL2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 169.0
  • Bit_score: 254
  • Evalue 6.50e-65
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGN47999.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 169.0
  • Bit_score: 254
  • Evalue 9.10e-65
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 173.0
  • Bit_score: 184
  • Evalue 1.80e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lachnospiraceae bacterium 3_1_57FAA_CT1 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 522
ATGGATAAGGACTTTCTTCTGATCAATAAAATGAAGAACGGTGATGAAGCAGCTATGGAAAGCTTCGTACGCAGGTATTATCCGCAGATACTGCGTTATTGTCATTACCATATAGCTGATAAAAGCTTTGCAGAAGATATGGCGCAGGAGACTTTTGAAAAATTTTTTGCGGCCCTTCCTGTCTATCGGCATCGTGGAAAGGCACTGAATTATCTGTATACCATTGCCGGAAACCTTTGCAGGGATTTGTATAAAAAAAGGGCGGACATCCCTTTAAGGGAAGTGCCGGACGCAGGAAATTACCAGATGGATCCTGTCAATACCAGGCTGGATATGGAAAAGGCTCTTGCGGGGCTGTCTCAGGAGTCCAGGGATGTACTTATTTTGTATTTTTTTCAGGAACGGAAGCAGCGGGAAATCGCAGAGATTTTGAATATAGGGCTTCCGCTTGTAAAGTACAGGCTGAAGCAGGCAAAGCTGCAATTGGGCGGTCTTTTGGGAAAGGAGGATATGGCGGAATGA
PROTEIN sequence
Length: 174
MDKDFLLINKMKNGDEAAMESFVRRYYPQILRYCHYHIADKSFAEDMAQETFEKFFAALPVYRHRGKALNYLYTIAGNLCRDLYKKRADIPLREVPDAGNYQMDPVNTRLDMEKALAGLSQESRDVLILYFFQERKQREIAEILNIGLPLVKYRLKQAKLQLGGLLGKEDMAE*