ggKbase home page

L3_122_000G1_scaffold_343_25

Organism: L3_122_000G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 18
Location: comp(27757..31389)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 1210.0
  • Bit_score: 2335
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 1210.0
  • Bit_score: 2335
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 1210.0
  • Bit_score: 1707
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella sp. 4_8_47FAA → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3633
ATGCTCATTCACCGTATAGCCGCGCAGCTCTACACTGCCGAGGCCTTGCAGACCGTCGAGGCCGGACTCGATGCCGGCGAGGACGTGACGCTGGCCGTGTCGCAGTCGGGCCGTACGCTTATGGCGGCCGCCCAGTTTGCGCGCCGTCCGCGACCGACGGTCTACATTGTGAGCGGCGAGGACGCGGCCGATCGCGCCGCGCGCAGCCTTGCCGCCTACGTGGGCCTAGCACATGTGTGCCGTTTTCCCGAGCGCAAGGACTATCCGTGGCGCGAGCAGGCGCCCGACGACGCCGTGGTAGCCCAGCGCTGCGAGGCGCTCGGGCGCATCGTACGCGGGGACAACTGCATCATGGTCGCCTCGGCCCGCGCACTGCTGCGTTGCGTGCCGCCGGTCGAGAGCCGCTACTGGGAGTCGACGACCTTTGCGGTGGGCGAGGAGATTCCCTTTGACGAGGTGCCACAGCGTCTGGTGGGCATGGGCTACACCAATGCCGGCGCCGCCGACGCGCCCGGCCTGTTCCGTGTGCACGGCGACACCGTCGAGGTGTTTCCCGCGCAGGAAAAGGCGCCCGTGCGCATTGAGTTTTTCGGCGACGAGATCGACCGCATCCGCCGCATGGTGAGTTCAACGGGCCAGACCATCGGCAACGAAGACAGCATCGAGATCTTCCCGTGCCGCGAGCTGGCGCTTACCGACGAGGCCGTCCACAACATGCACGTGGCGCTCTACCGCGCAAGCCAGGACGACAGCAAGCTGGCGGCGCTGCTCGAGATGGTGGATGCACGTATCGTCACGCCTGAACTCGACCGCTTTTTGCCGGTGATGTACGGCCAGACCGTAAGCCCGCTGGCGCACGTGAGCGGCAAGGCGCTCGTGGTTTTGTCCGAGCCGCGCTCGCTGTTCGACGATTGCCTGCGCGCCTACGAGGATATCGAGGCGCGTGCCGGCGAGGCGGGGGTCGACCGCCTGGACGGCCTGTACGTGCGTGCCCAGCAACTCGACTTTGGCGCTCAACAGCGCCTGAACTACGTGAGCCTCATCCGTGCCGGCGGTGCGGTGACGGCCGAGCTCAAGATTGAGCAGCCTGCTATCGCAGGCTCGGACAACCGTTTTATGACGCGCATCCAGGAGGTCGTGGGCAAGCGCTATGCCTGCGTGTTTGCCATCCCCGACCGCGGTGCGCGCGAGTCGATGGAGCTCACCTTTGGCGACGAGGGCATTACCTTTGAGGAATCGCTGACCGCGGCGCCCGAAAATACCGGCGCTATCGGCGACCGCGTGCGCGTGGCAGCGGCGGATTCCGCCGACCGTGCCGCACGCCAGGAGGCCCATGCTTCCATTCGCGAGCGTCGCGCCGACGCGCTCAACGCCCGCCCGCTCGAGGCGGGCGCCGCGCAGGCTGCCGCCGGCGCCGCCGTGCCCACCATCTCGCGCGGGCGCGTGACCTTTGTGGACGCTGCCCTGCCGCAGGGCGTGGTGGTGCCCGACGCCAATTTTGCCGTGTTCTCGATCGCCGACCTCAACGCTCGCATGGATGCCAACCGCGCGCGCAGCCGCCGCAAGGTTGACATTACACAGATCACCTTCCCGTTTAAGCCGGGCGACTACGTGGTGCACGCTACCCACGGTATCGCGCTCTTTAGCGAGATCGCGCGCCAGGAAGTGGGCGGCAAGGAACGCGACTACTTTTTGCTGGAATACGCCGATGGCGACAAGCTCTACGTGCCGCTGGAGCAGGTTGACCGCATTACGCGCTACGTTGGTCCCGACGGCGATAAACCGCGCTTGACCAGGCTCAACACCGCCGACTGGACGCGGGCCACCAACAAGGCGCGCAAGAATGCCAAAAAGCTGGCGTTTGACCTGGTCGACCTGTATACGCGCCGCTCGTCGATTACCGGTATCGCCTGTCCGCCCGACACGCCCGAGCAGATCGAGATGGAGGAAAGCTTCCCCTACGACGAGACGCGCGACCAGCTGGAGGCTATCGCCGACATCAAGGCCGACATGGAGGCACCCAAGCCCATGGACCGCCTACTGTGCGGCGACGTGGGTTTCGGCAAGACCGAGGTCGCCCTGCGCGCGGCCTTTAAGTGCGTGGACTCCGGCCGCCAGGTCATGGTGCTCTGCCCCACGACCATTCTGGCCCAACAGCACTACGAGACATTCTTTGAGCGCTTTGCCCCGTTTGGCCTGGAGGTCGAGGTGCTCAGCCGCTTCCGCACCTCGGCGCAGCAAAAGCGCGCGCTCAAGGCGTTTGCCGAGGGCACGATCGATGTGCTCATCGGCACGCACCGCTTGCTTTCTGCCGATGTGAACCCCAAGAACCTGGGCCTGGTGATCATCGACGAGGAGCAGCGCTTTGGTGTGCAGCACAAGGAGCAGCTCAAAAACCTGCGCGAGCAAATCGACGTGCTCACGCTCTCGGCAACGCCCATCCCGCGTACCATGCAGATGGCCACGAGCGGCGTGCGCGATATGAGTCTGATCACCACGCCGCCGACCGGGCGTCGTCCCGTGATCGTGCACGTGGGGGAGTACGACCCCGACGTGGTGAGTGCGGCGATTCGCCTAGAGGTGGGCCGCGGCGGTCAGGTGTATTACGTGTCCAACCGCGTCAAGACCATCGACGATGCCGTGGCGCGCGTGCACGAGGCCGCGCCCGAGGCGCGCGTGGGCGTGGCGCACGGCAAGATGAGCCCGCGCGAGGTCGAGGACGTGATGATCGAGTTTGCGACCAAAAAGATCGACGTGCTTATCGCCACGACCATCGTGGAGAGCGGTATCGACAACGCGACCGCCAACACGCTGATCATCGAGGACTCGCAGCGCTTGGGCCTGGCGCAGCTCTACCAGCTCAAGGGTCGTGTGGGTCGCTCTGCCACGCAGGCCTACGCGTACTTTATGTTCCCGGGCGAGCTGCCACTCACCGAGGAGGCGACGGCGCGCCTGACCGCACTTTCCGAGTTCCAGGACCTGGGCAGCGGCATGCGCATCGCCATGCGCGACCTGGAGATTCGCGGCGCCGGCTCGCTTATGGGCGCCGAGCAGCACGGCAACCTGTCGAGCGTGGGCTTTGACCTGTTTACGCAGATGCTGGGCCAGGCGGTGGCCGAGGCGCGCGGCGATGACGACGCCGGCGTGGAGGCGGCGAGCGTGGGCATTAACCTGCCGGCCGACTACTTCTTGTCCGAGGAGTACCTGCCGGCGGTGGATCAGCGCGTGCTCGTGTACCGCAGGCTCGCAGCGGCCGAGGACCTGGAGAGCATCGATGAGGTGCAGGAGGAGACCGAGGCTGCGCATGGCGAGCTGCCGTTGGCGGGGCTCAACTTGTTCAACCGCGCGCGCATCCGCATTCGCGGCGAGCGTCTGGGGCTCGAGAGCGTCACGCTCAGTGGCGGTCGCATCACGTTTTTGGGCGTCGACGTGCCCAAGAAGGTGGCCTTTGAGCTTAAGACTCGCTATGGCGCGGTGAATTTCCCCAAGAGCCGCAAGCTGTCGGTACCCTACAAGGCAGGCGCCGGTGCGGGCAGCGGCCTGGGTCGCGGCCTCGACGCCAATGACGGTACCGGCCCCGTGGCCGCGGCGCTCATGCTGCTACAGCAGCTGGGTGCGAGCGACGACGACTAA
PROTEIN sequence
Length: 1211
MLIHRIAAQLYTAEALQTVEAGLDAGEDVTLAVSQSGRTLMAAAQFARRPRPTVYIVSGEDAADRAARSLAAYVGLAHVCRFPERKDYPWREQAPDDAVVAQRCEALGRIVRGDNCIMVASARALLRCVPPVESRYWESTTFAVGEEIPFDEVPQRLVGMGYTNAGAADAPGLFRVHGDTVEVFPAQEKAPVRIEFFGDEIDRIRRMVSSTGQTIGNEDSIEIFPCRELALTDEAVHNMHVALYRASQDDSKLAALLEMVDARIVTPELDRFLPVMYGQTVSPLAHVSGKALVVLSEPRSLFDDCLRAYEDIEARAGEAGVDRLDGLYVRAQQLDFGAQQRLNYVSLIRAGGAVTAELKIEQPAIAGSDNRFMTRIQEVVGKRYACVFAIPDRGARESMELTFGDEGITFEESLTAAPENTGAIGDRVRVAAADSADRAARQEAHASIRERRADALNARPLEAGAAQAAAGAAVPTISRGRVTFVDAALPQGVVVPDANFAVFSIADLNARMDANRARSRRKVDITQITFPFKPGDYVVHATHGIALFSEIARQEVGGKERDYFLLEYADGDKLYVPLEQVDRITRYVGPDGDKPRLTRLNTADWTRATNKARKNAKKLAFDLVDLYTRRSSITGIACPPDTPEQIEMEESFPYDETRDQLEAIADIKADMEAPKPMDRLLCGDVGFGKTEVALRAAFKCVDSGRQVMVLCPTTILAQQHYETFFERFAPFGLEVEVLSRFRTSAQQKRALKAFAEGTIDVLIGTHRLLSADVNPKNLGLVIIDEEQRFGVQHKEQLKNLREQIDVLTLSATPIPRTMQMATSGVRDMSLITTPPTGRRPVIVHVGEYDPDVVSAAIRLEVGRGGQVYYVSNRVKTIDDAVARVHEAAPEARVGVAHGKMSPREVEDVMIEFATKKIDVLIATTIVESGIDNATANTLIIEDSQRLGLAQLYQLKGRVGRSATQAYAYFMFPGELPLTEEATARLTALSEFQDLGSGMRIAMRDLEIRGAGSLMGAEQHGNLSSVGFDLFTQMLGQAVAEARGDDDAGVEAASVGINLPADYFLSEEYLPAVDQRVLVYRRLAAAEDLESIDEVQEETEAAHGELPLAGLNLFNRARIRIRGERLGLESVTLSGGRITFLGVDVPKKVAFELKTRYGAVNFPKSRKLSVPYKAGAGAGSGLGRGLDANDGTGPVAAALMLLQQLGASDDD*