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This organism can only be binned in the context of its binning project GD2017-1_S_2p5_S6_Biohub_coassembly. Please contact the project owner (coralline@gmail.com) to become a member and gain access.

L3_122_031G1_scaffold_13_28

Organism: L3_122_031G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 17
Location: 53445..54194

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQE9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 249.0
  • Bit_score: 495
  • Evalue 1.80e-137
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT24393.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 249.0
  • Bit_score: 493
  • Evalue 1.70e-136
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 249.0
  • Bit_score: 492
  • Evalue 5.70e-137

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 750
ATGAAACTCACTACAAAAGATACTAAAACTTCAAAAAAATTGCTCTATACATCTGTATATGATAAGTTATATAAAATGATTATTGATGGGGAATACCCTTTAAATTCAAAATTACCCTCTGAGCCTGAACTTGCAAAAAGCTTTGGGGTTAGCCGAATGACTTTGCGTCAAGCACTTGCTTTACTGCAAGATGACGGTTTAGTAAAAAATATAAGAGGTAAAGGGAATTTTATAATATCTCCAGAAAAATGTGCTAAAAGAGATTTCTTAGAGTTAATAGGCAATCCTATATACAAGTGTCATACTGAAAAAATTCACGATATTGAATTTGTATTCCGCTTAGAACTTGATAGTGATTATACTAAACAGGTTTTAGAAAAGGATTCCACAGCAGTGGTTGCTTGTGAACGTTATTATAAAAGCAAAAATAAAGTTTTAGCCTACGCTTTTACCTTTATATCTGTTGAAACCATAAAAGAACTAAAAATAGATTTAAATAATGAAAGTGAGCTACTAGACTTTCTTGAACATAAATCCTATGAAATATCAGAAAGTTCTATATTAGAAATAAAGCATTCCTCTGCTGGTAACTCCTTAAATCCAAAATATAAGCTTGTTGGAGGAAATCAATGCGATTTAATCTTAGAAACATTATATGCTAATGATTATTCCCCTCCTATATTATTTAACAAATACTATATCCCATCTCAATATAGTACTTTTAAAATTAAAGCAAGAAAAAAAGAATAA
PROTEIN sequence
Length: 250
MKLTTKDTKTSKKLLYTSVYDKLYKMIIDGEYPLNSKLPSEPELAKSFGVSRMTLRQALALLQDDGLVKNIRGKGNFIISPEKCAKRDFLELIGNPIYKCHTEKIHDIEFVFRLELDSDYTKQVLEKDSTAVVACERYYKSKNKVLAYAFTFISVETIKELKIDLNNESELLDFLEHKSYEISESSILEIKHSSAGNSLNPKYKLVGGNQCDLILETLYANDYSPPILFNKYYIPSQYSTFKIKARKKE*