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L3_128_000G1_public_UNK

In projects: L3_128_000G1_public
Displaying items 551-600 of 64267 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_128_000G1_scaffold_34045
Species: Clostridium perfringens (100%)
4 1786 bp 22.12 4539.47 84.99
L3_128_000G1_scaffold_31494
Species: Clostridium perfringens (100%)
5 4358 bp 26.27 4539.00 77.37
L3_128_000G1_scaffold_26937
Species: Clostridium perfringens (91.67%)
12 9434 bp 28.94 4538.35 93.01
L3_128_000G1_scaffold_50543
Species: Bifidobacterium longum (100%)
2 1483 bp 62.44 4534.09 99.73
L3_128_000G1_scaffold_27608
Species: Clostridium perfringens (100%)
4 2427 bp 26.70 4532.20 82.08
L3_128_000G1_scaffold_72156
Species: Clostridium perfringens (100%)
2 1397 bp 33.43 4531.25 102.43
L3_128_000G1_scaffold_53019
Species: Clostridium perfringens (100%)
2 1554 bp 28.38 4526.64 97.10
L3_128_000G1_scaffold_43676
Species: Clostridium perfringens (100%)
2 1896 bp 29.64 4524.53 92.72
L3_128_000G1_scaffold_3887
Species: Clostridium perfringens (60%)
20 25356 bp 27.82 4522.35 83.97
L3_128_000G1_scaffold_77800
Species: Clostridium perfringens (100%)
2 1133 bp 28.86 4521.45 65.40
L3_128_000G1_scaffold_63727
Species: Bifidobacterium longum (100%)
1 1016 bp 60.04 4518.31 99.80
L3_128_000G1_scaffold_32136
Species: Clostridium perfringens (100%)
1 1880 bp 28.62 4518.03 95.27
L3_128_000G1_scaffold_58625
Species: Clostridium perfringens (100%)
4 2339 bp 28.94 4515.97 84.14
L3_128_000G1_scaffold_70000
Species: Clostridium perfringens (100%)
4 2036 bp 26.62 4515.69 88.26
L3_128_000G1_scaffold_32861
Species: Clostridium perfringens (100%)
3 2845 bp 29.21 4514.71 81.83
L3_128_000G1_scaffold_24711
Species: Clostridium perfringens (100%)
4 2404 bp 24.25 4514.48 66.39
L3_128_000G1_scaffold_62048
Species: Clostridium perfringens (100%)
1 1041 bp 31.80 4513.69 99.71
L3_128_000G1_scaffold_37493
Species: Clostridium perfringens (100%)
3 1636 bp 26.16 4511.00 92.79
L3_128_000G1_scaffold_59230
Species: Clostridium perfringens (100%)
1 1469 bp 31.11 4510.82 99.86
L3_128_000G1_scaffold_64429
Species: Clostridium perfringens (100%)
3 1858 bp 25.78 4510.33 65.39
L3_128_000G1_scaffold_46976
Species: Clostridium perfringens (100%)
5 3916 bp 26.33 4509.04 79.06
L3_128_000G1_scaffold_20784
Genus: Bifidobacterium (100%)
4 3219 bp 58.09 4507.50 63.75
L3_128_000G1_scaffold_40390
Species: Clostridium perfringens (85.71%)
7 3602 bp 26.99 4507.25 81.12
L3_128_000G1_scaffold_58876
Species: Clostridium perfringens (100%)
3 1521 bp 26.89 4506.31 75.54
L3_128_000G1_scaffold_48173
Species: Clostridium perfringens (100%)
3 1303 bp 26.48 4503.11 82.89
L3_128_000G1_scaffold_37900
Species: Clostridium perfringens (100%)
3 2137 bp 25.69 4501.82 80.72
L3_128_000G1_scaffold_64522
Species: Clostridium perfringens (100%)
2 1501 bp 24.38 4498.90 92.14
L3_128_000G1_scaffold_27221
Species: Clostridium perfringens (80%)
5 3620 bp 33.87 4496.19 87.18
L3_128_000G1_scaffold_27409
Species: Bifidobacterium breve (75%)
4 2171 bp 62.05 4495.92 77.94
L3_128_000G1_scaffold_67445
Species: Clostridium perfringens (100%)
2 1664 bp 26.32 4494.59 89.06
L3_128_000G1_scaffold_45018
Species: Clostridium perfringens (100%)
3 2544 bp 27.95 4493.93 94.10
L3_128_000G1_scaffold_53744
Species: Clostridium perfringens (100%)
2 2509 bp 28.42 4493.48 79.75
L3_128_000G1_scaffold_21742
Species: Bifidobacterium longum (66.67%)
3 2707 bp 64.57 4491.02 88.77
L3_128_000G1_scaffold_34205
Species: Clostridium perfringens (100%)
4 2030 bp 27.64 4490.54 96.80
L3_128_000G1_scaffold_86251
Species: Clostridium perfringens (100%)
4 1464 bp 32.51 4486.99 104.10
L3_128_000G1_scaffold_52285
Species: Clostridium perfringens (100%)
3 1456 bp 25.69 4484.44 58.31
L3_128_000G1_scaffold_11366
Species: Clostridium perfringens (100%)
7 5457 bp 25.89 4483.92 64.93
L3_128_000G1_scaffold_18596
Species: Bifidobacterium longum (75%)
8 5788 bp 61.59 4483.60 97.03
L3_128_000G1_scaffold_46276
Species: Clostridium perfringens (100%)
4 2703 bp 28.75 4482.69 86.90
L3_128_000G1_scaffold_43697
Species: Bifidobacterium longum (100%)
4 2782 bp 59.63 4482.64 84.87
L3_128_000G1_scaffold_54252
Species: Clostridium perfringens (100%)
4 2681 bp 28.91 4482.15 84.71
L3_128_000G1_scaffold_14551
Species: Clostridium perfringens (100%)
4 3958 bp 30.24 4480.67 95.58
L3_128_000G1_scaffold_82128
Species: Clostridium perfringens (100%)
1 1225 bp 30.04 4478.94 91.10
L3_128_000G1_scaffold_58803
Species: Clostridium perfringens (100%)
1 1093 bp 28.09 4474.89 99.91
L3_128_000G1_scaffold_17267
Species: Bifidobacterium longum (100%)
4 4671 bp 61.16 4474.53 82.85
L3_128_000G1_scaffold_54193
Species: Clostridium perfringens (100%)
3 2693 bp 29.15 4473.65 81.99
L3_128_000G1_scaffold_31729
Species: Clostridium perfringens (100%)
2 1902 bp 32.54 4471.45 99.37
L3_128_000G1_scaffold_61168
Species: Bifidobacterium longum (100%)
1 1055 bp 61.42 4471.28 77.63
L3_128_000G1_scaffold_31696
Species: Clostridium perfringens (100%)
1 1904 bp 30.41 4467.38 75.00
L3_128_000G1_scaffold_46162
Species: Bifidobacterium longum (50%)
4 2525 bp 60.71 4465.72 81.15
Displaying items 551-600 of 64267 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.