ggKbase home page

L3_129_000M1_scaffold_229_5

Organism: L3_129_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 15
Location: 6640..7566

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 308.0
  • Bit_score: 626
  • Evalue 1.20e-176
23S rRNA/1915/1917 synthase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RU24_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 308.0
  • Bit_score: 626
  • Evalue 8.50e-177
RNA pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 305.0
  • Bit_score: 540
  • Evalue 3.00e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides sp. HPS0048 → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 927
ATGGCTAAAGAAAAAAGACCTAAAAGAACCCCGGCTGAGAAAGCCCGGGCACAATATACCGGTTATTTAGTGAAGGAACCAATGGACCTCATGGGATTCCTCGCTGCTAAAATGCCGGATGCCAGCCGTACAAAGCTGAAATCATTATTAAGCAAACGTGTGGTTTATGTAGACAATGTAATAACCACTCAGTTTGACTTTGCCTTAAAGCCGGGTATGAAGGTACAGATCAGCAAAGATAAAGGCCGGAAAGAATTCAATAACCGCCTGCTGAAGATTGTGTACGAAGATGCCTTTATCATTGTAATAGAGAAAAAGGAAGGGTTACTTTCAGTGAACACCGAACGCCAGAAAGAACGTACAGCCTATACCATCCTGAATGAGTATGTACAACGCTCGGGCAAACACCACCGCGTATATGTAGTACATCGTCTGGACCGCGATACATCAGGTATAATGATGTTTGCTAAAGACGAAAAGACCCAGCACACTTTGCGCGAATACTGGCATGATATTGTTACAGATCGTCGTTATGTAGCAGTTGTGGAAGGCGAAATGGAGAAGGATCACGGCACAGTAACCTCCTGGTTAACAGACCGTACATTGTATGTAAGTTCCAGCCAATACGATGATGGTGGCTCCAAATCAATCACACATTATCACACCATCAAACGTGCCAACGGATACTCATTGATGGAACTCGATCTGGAAACAGGACGTAAGAATCAGATTCGTGTACATATGCAAGACTTGGGACATCCCATTATCGGTGACGGAAGATATGGTGGCGAAGGTGTTCCCAACCCTATTGGCCGATTGGCTCTGCATGCATTCAAACTTTGTTTCTATCATCCGGTGACAAACGAACTAATGGAGTTTGAGACGCCGTATCCGCCTAATTTCAAAAAGTTGTTTCTAAAGCAATAA
PROTEIN sequence
Length: 309
MAKEKRPKRTPAEKARAQYTGYLVKEPMDLMGFLAAKMPDASRTKLKSLLSKRVVYVDNVITTQFDFALKPGMKVQISKDKGRKEFNNRLLKIVYEDAFIIVIEKKEGLLSVNTERQKERTAYTILNEYVQRSGKHHRVYVVHRLDRDTSGIMMFAKDEKTQHTLREYWHDIVTDRRYVAVVEGEMEKDHGTVTSWLTDRTLYVSSSQYDDGGSKSITHYHTIKRANGYSLMELDLETGRKNQIRVHMQDLGHPIIGDGRYGGEGVPNPIGRLALHAFKLCFYHPVTNELMEFETPYPPNFKKLFLKQ*