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L1_007_000M1_scaffold_65_24

Organism: dasL1_007_000M1_concoct_55_fa

near complete RP 47 / 55 BSCG 50 / 51 ASCG 14 / 38
Location: comp(30046..30909)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 287.0
  • Bit_score: 336
  • Evalue 3.00e-89
Shikimate dehydrogenase n=10 Tax=Clostridium difficile RepID=T2XGY7_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 287.0
  • Bit_score: 336
  • Evalue 2.10e-89
ydiB; shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 287.0
  • Bit_score: 335
  • Evalue 7.90e-90

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 864
GTGCATATTTCAGGACATACCCGGCTGCTCGGTCTCATCGGGACCCCGGTCGATCATTCTAAGTCTCCACAGATGTATAATTACTGTTTTCAGAAATTCAATCAGGACTTTGCGTATTTTGCTTTCGATGTCAATGCAGACAATGTCGAAAAAGCCCTTCATTCTCTGAAAACGTTGAACTTTCGCGGTGCTAATGTGACCATGCCTTTAAAAAATGCCGTCATTCCCTTTCTCGATAAGGTATCGCCGGCAGCCAAGGCAGTCGGTTCCGTCAATACCATCGTCAACGACGACGGTGTCCTCACCGGCCACATTACGGACGGCGCAGGCTATACGCTCAATCTTAAAACCGGTGGTGTGTCGGTAAAAGGGAAGAAGATCACCTTAGTCGGTGCCGGCGGCGTTGCCTCAGCCATCATGATCCAATGTGCCTTAGAAGGGGTACGGGAGATATCCGTATTTAACTTGAAGGATAGTTTCTGGTCTCGGGCCGAAGCCAATGTAAAGGCTATCTGTCAGTGCGTGCCCGGCGTTAAGATCACCTTGGATGATTTGGGGGATAAAGACCTGCTCAAGCGTGAAATTGCCGACAGCGATATCCTTTCGAATGCTACTCGCTTGGGAATGGCTCCCTATGAAGATCAGAGCATCATCGACGGCCTCGACGTACTGCGTCCTGATTTGATTGTCACTGACGTCGTCTATGCGCCGGCTGAAACGAAACTCCTGAAACTGGCTAAAGCCGCAGGCTGCCGCACCTTTGAAGGCCTTGGCATGCTGCTCTTCCAAGGCGCTGAAGCATATCGACTCTATACCGGCGGCACGATGCCTGTCGATGAAATTAAGGACTTGCTCTATAAATAG
PROTEIN sequence
Length: 288
VHISGHTRLLGLIGTPVDHSKSPQMYNYCFQKFNQDFAYFAFDVNADNVEKALHSLKTLNFRGANVTMPLKNAVIPFLDKVSPAAKAVGSVNTIVNDDGVLTGHITDGAGYTLNLKTGGVSVKGKKITLVGAGGVASAIMIQCALEGVREISVFNLKDSFWSRAEANVKAICQCVPGVKITLDDLGDKDLLKREIADSDILSNATRLGMAPYEDQSIIDGLDVLRPDLIVTDVVYAPAETKLLKLAKAAGCRTFEGLGMLLFQGAEAYRLYTGGTMPVDEIKDLLYK*