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L1_007_000M1_scaffold_137_21

Organism: dasL1_007_000M1_concoct_59_fa

near complete RP 50 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: comp(26566..30027)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 1151.0
  • Bit_score: 2244
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 1151.0
  • Bit_score: 2131
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H318_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 1151.0
  • Bit_score: 2244
  • Evalue 0.0

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Taxonomy

Faecalibacterium prausnitzii → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3462
ATGTACGAAGCGCTACTGAAAAGCACAGCGGAATATCAGAAGATCGCGGAGAGCCTGCGCACCCCGGGCCCGGCGGCGCTGTTCGGCCTGCCGCCTGCGGGCCGTGCCCTGCTGTACGCCGCCCTGCAAAAGGACCTTGACCGGGTGCTGTGCATCGTGACCCCCGGCGAGGCCGAGGCCACCCACTTTGCAGACGACCTCAAGGCGCTGGGCCTGACCGCGGCGGTGTTCCCGCCCCGTGACTTCATGCTGCGGCCAGTGGAGGGCGCGGGCCGCGAGTACGAGTACCGCCGCCTGTCGGTGCTGGGCGCGCTGGCGGGCGGGCGGCTGAACGCCGTCTGCGTGCCCGCCGAGGCGCTGCTGCAATACACGGTGCCCCGGGATGAGTTCCTGCGGAACACCCTCACCCTCAAGCCCGGCATGGTCTACAACCGGGAAGCGCTGGTGGCGCGGCTCTTTGCCGCCGGGTACGTCCGGCGCAGTCAGGTGGACGGCCCGGGCCAGTTCAGTGTGCGCGGCGATATCGTGGACATCTACGCGCCGGACATGCACCAGCCCGCCCGAGTGGAATACTGGGATGACGAGATCGATTCACTGGCCTCCTTCGACCTGCTGACCCAGCGCCGGGACGGCAGTCTGGAAAAGATCTACCTCTCCCCCGCCCGCGAGGTGCTGTTCGGCAGCACCGCCGAGACGGCCGAGGCCCTGCGCGGAGCCATCAAAAAGACGCGGGGCAAGCGCCGCACCGCCATGGAAAAGGCCACAGAAGCAGACCTTGCCCAGCTGGATTCCGGCCTGATGCCCGAAGCCATGGACAAGTATTACGGCATCCGCTATCCGCAGCCCGCCACCCTGCTGGACCATCTGGACAGCCCCATCTTTGTGCTGGACGAGGTGGGCGGCATCCGGGATGCCCAGAAGGCCACCGAGTACCGCCGGGGCGAGGAGCTGACCGGCCTGCTGGAGGAGGGCGTGCTCTGCCCCGGGCTGGACGTGCTCTACCAGACCATGGACGACCTTGCCATTGCGGCCCAGAAACAGAGCACCCTGCTGTGTGAGAACTTCCTGCGGGGGATGAACGAATTCAAGCTGAAGGACCTCATCAATGTGGAGGCCTTTGCGGCCCCCAACTGGGGCGGCGACCTGGCCTCCCTGCGGGAGGATCTTGACCCGCTGATCGCACAGGGCTATGCCGTCACCCTCTTCTCCGGCACCCCCAAGGGTGCCGCCGCCCTGACCCGGGACCTGACGGACAAGGGCTACTCCGTGAGCATGAGCCGGGACGTGCGCCCGGCCAAGGGCATCGTGCAGGTGCTGCCCGGCCACCTGACTGCAGGCTGCACCTTCCCCTTTGCCCACACGGCGGTCATCTCCTCCCGGCGGCACGGGCTGGATGAAGAAACCGCCGCCGAGAACAAAAAGCGCAAAAAGAACAAAAACGCTCTGTCCAGCCTTTCGGACATCAAGCCCGGGGACTATGTGGTGCACCAGAGCCACGGCATCGGCATGTACGCGGGCATCCAGCGGCTGGAAGTGCAGGGTGCCATCAAGGATTACCTGAAGATCCAGTATTCCGGCTCCGATGTGCTCTATGTGCCGGTGACCCAGCTGGACCTGCTCAGCCGCTACACCGCCCCCGGCGACGAGGAAAAGGTGAAGCTGGCCAAACTGGGCGGTACCGAATGGCAGCGCACCCGCGCCAAGGTAAAAAAAGCCACCGAGGAGATGGCACAGGAGCTCATTGAGCTGTACGCCCGGCGCAGGCAGGCCCAGGGATACTCCTTCCCGCCCGACGGCGACTGGCAGAACGATTTTGAGACCCGCTTTGAGTACGACGAGACCGACGACCAGCTCCACGCCACCGCCGAGATCAAGCAGGACATGGAAAAGCCCTACCCGATGGACCGCCTGCTCTGCGGCGACGTGGGCGTGGGCAAGACCGAGGTTGCCCTGCGCGCGGCCTTCAAGTGCGTGATGGGCGGCAAGCAGTGCGCCCTTCTGGCTCCCACCACCCTGCTGGCCTGGCAGCACTACAACACCCTGCTCTCCCGGATGGAGGCCTTCCCGGTGAAGATCGGGATGCTCTCCCGCTTCCGTACCGCAAAACAGCAAAAGGAGACCCTGCGGGGCCTGCAGTCCGGCAGCGTGGACATCGTGGTGGGCACCCACCGCCTGCTCTCCAAGGATGTGCGTTTCCACGACCTGGGCCTTGTCATCATCGATGAGGAGCAGCGGTTCGGCGTGAAGCACAAGGAGAAGCTGAAGGAAAACTTCATCGGCGTGGATATGCTGACCCTCTCGGCCACGCCCATCCCCCGCACCCTGAACATGGCCATGAGCGGCATCCGCGACCTGTCCACCATCGAGCAGCCGCCCATTGAGCGCCAGCCCGTGGAGACCTTTGTGCTGGAGTACAACGATGTCATCCTTGCCGAAGCCATGAAGAAGGAGCTGGCCCGGGGCGGTCAGGTGTACTACCTGCACAACCGGGTGGACAACATCGAGTCCACCGCCGCCCATGTCAGCCAGCTGGTGCCCGGTGCCCGGGTGGGCATTGCCCATGGCAAGATGACCGAGGAGGAGCTGAACCCGGTCTGGCAGCATCTGCTCAACGGCGAGATCGACATTCTGGTCTGCACCACCCTGATCGAAACGGGCATCGATGTGCGCAACTGCAACACCCTTATCATTGAGGATGCCGACCGGATGGGCCTTGCCCAGCTGTACCAGATCCGGGGCCGGGTGGGCCGCTCCGGCCGCAAGGCCTATGCCTACTTCACCTTCCGGCGGGACAAGACCCTGACCGACATCGCCCAGAAGCGGCTTTCCGCCATCCGGGAGTTCACGGCCTTCGGCTCCGGCTTCCGCATCGCCATGCGCGATCTCCAGATCCGCGGCGCGGGCAGTCTGCTGGGCCACAGCCAGCACGGCCACATGGAGGCCGTGGGCTACGACCTCTATGTGAAGATGCTGGGGCAGGCCATCGCCCGGGCCAAGGGCGAGCCGGTGCAGCGCGACAAGAGCGAGTGCCTGATCGACCTGCGGGTGGATGCCTACATCCCCGAAACGTACATTGCCGACGGGCCGGGCCGCATTGAAGCCTACAAGCGGATCGCAGCCATCCAGACCCCCGAGGATGCCGCCGATGTGCTGGACGAGCTCATCGACCGGTACGGCGACCCGCCGCCCTCGGTCAGCGATCTGGTCAATGTCTCGCTGGCGCGGGTGCAGGCCACCGCTGTGGGCGTGTACGAGGTGACCCAGAAGAAGGACACTCTGGTGCTGCAGGTAGAGCAGCTGGACCTCCGGATGATCCAGGGCCTGCTGGTGGCCTTCAACGGCCGCGTTGTCACCGGGGCCGGTGCAAAGCCCTACCTCTCCGTCACCCTGCAAAAAGAGGAAAAGCCGCTGGAGCTGCTGCAGAGCATCCTCCGGGCGATGCAGGATATTTTGAAAGATTAA
PROTEIN sequence
Length: 1154
MYEALLKSTAEYQKIAESLRTPGPAALFGLPPAGRALLYAALQKDLDRVLCIVTPGEAEATHFADDLKALGLTAAVFPPRDFMLRPVEGAGREYEYRRLSVLGALAGGRLNAVCVPAEALLQYTVPRDEFLRNTLTLKPGMVYNREALVARLFAAGYVRRSQVDGPGQFSVRGDIVDIYAPDMHQPARVEYWDDEIDSLASFDLLTQRRDGSLEKIYLSPAREVLFGSTAETAEALRGAIKKTRGKRRTAMEKATEADLAQLDSGLMPEAMDKYYGIRYPQPATLLDHLDSPIFVLDEVGGIRDAQKATEYRRGEELTGLLEEGVLCPGLDVLYQTMDDLAIAAQKQSTLLCENFLRGMNEFKLKDLINVEAFAAPNWGGDLASLREDLDPLIAQGYAVTLFSGTPKGAAALTRDLTDKGYSVSMSRDVRPAKGIVQVLPGHLTAGCTFPFAHTAVISSRRHGLDEETAAENKKRKKNKNALSSLSDIKPGDYVVHQSHGIGMYAGIQRLEVQGAIKDYLKIQYSGSDVLYVPVTQLDLLSRYTAPGDEEKVKLAKLGGTEWQRTRAKVKKATEEMAQELIELYARRRQAQGYSFPPDGDWQNDFETRFEYDETDDQLHATAEIKQDMEKPYPMDRLLCGDVGVGKTEVALRAAFKCVMGGKQCALLAPTTLLAWQHYNTLLSRMEAFPVKIGMLSRFRTAKQQKETLRGLQSGSVDIVVGTHRLLSKDVRFHDLGLVIIDEEQRFGVKHKEKLKENFIGVDMLTLSATPIPRTLNMAMSGIRDLSTIEQPPIERQPVETFVLEYNDVILAEAMKKELARGGQVYYLHNRVDNIESTAAHVSQLVPGARVGIAHGKMTEEELNPVWQHLLNGEIDILVCTTLIETGIDVRNCNTLIIEDADRMGLAQLYQIRGRVGRSGRKAYAYFTFRRDKTLTDIAQKRLSAIREFTAFGSGFRIAMRDLQIRGAGSLLGHSQHGHMEAVGYDLYVKMLGQAIARAKGEPVQRDKSECLIDLRVDAYIPETYIADGPGRIEAYKRIAAIQTPEDAADVLDELIDRYGDPPPSVSDLVNVSLARVQATAVGVYEVTQKKDTLVLQVEQLDLRMIQGLLVAFNGRVVTGAGAKPYLSVTLQKEEKPLELLQSILRAMQDILKD*