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L1_007_000M1_scaffold_81_2

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(1427..1930)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZV1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 167.0
  • Bit_score: 326
  • Evalue 9.90e-87
sig10; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 167.0
  • Bit_score: 332
  • Evalue 6.70e-89
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO04566.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 167.0
  • Bit_score: 332
  • Evalue 3.30e-88

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Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 504
ATGGACGTCAATTTGAAAAATACGCCTTCAGAGATAGACAGGCTTATAGATAAATATAAAAGTACCGTTTATGGAATCGCTATAGCACGTCTTGGCTCAAAAGCAGATGCAGACGATGTTTTTCAGGAAGTGTTTCTTGCAGCTTATCGAAAGGGGATAACAGTCAAGGACAATGATGAGGAGAAGTTCTGGCTTATCAGGACTACTCTCAATCAGTGCAAAAAGATAACATTGTCAAGCTGGCGCAGGCGTACAGTTCCCCTTGAAGAAAGAAAGGAAGAGGTAAGCTTTTTCAGAAGCCGCGAGGAAAATGATGTTTTCTGTGCTGTAACGGAACTGCCTGAAAAATACAGAATGGTGGTCTATCTTTACTATTTTGAAGAGGTGTCTACTGATGAGATAGCAAAGATAATGAAAGTACGCAGTGGAACGGTGAGAATGCAGCTTACAAGGGCAAGAGAAATGTTGAAAGAAAAGCTGAAAGGAGGATATTTCTATGAATAA
PROTEIN sequence
Length: 168
MDVNLKNTPSEIDRLIDKYKSTVYGIAIARLGSKADADDVFQEVFLAAYRKGITVKDNDEEKFWLIRTTLNQCKKITLSSWRRRTVPLEERKEEVSFFRSREENDVFCAVTELPEKYRMVVYLYYFEEVSTDEIAKIMKVRSGTVRMQLTRAREMLKEKLKGGYFYE*