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L1_007_000M1_scaffold_87_56

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(67899..70028)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCB0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 709.0
  • Bit_score: 1381
  • Evalue 0.0
sig2; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 709.0
  • Bit_score: 1386
  • Evalue 0.0
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO03763.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 709.0
  • Bit_score: 1386
  • Evalue 0.0

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Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2130
ATGGAAAAAGATGATATCAAAAAGCTTGTATTGCAGGCGGCACAGGGAAACAAGGCGGCGTTCGGTGCGCTTTATGAAGAAACGGGCAGAACAGTGTATTTTAGCTGTCTTAAGCTTCTTGGCGACCCACAGCTTGCAGAGGATATCACTCAGGAAACTTATCTTACAGCCCTTCAAAAGCTTGGCACTCTTGCACAGCCTGAGAATTTTCCAGCATGGGTAAACAGGATAGGGATAAATCTCTGCAAAATGCACTTTAGAAACAATTCCGCCCCTGAGGACAACTCAGAGGAGATAATAGAGGAAATCCCTGACGAGGGGCTTATCCCGGAGGAATATGTGAGCAATGACGCTAAAAGAAAGATAATAATGGATATTATCGACACTGTTCTCACAGAGGAGCAAAGGCGTTCGGTGATACTGTATTATTTTGATATGCTCACAGTGCCTGAGATAGCAGAGGTAATGAACTGCACCACAGGTACAGTAACTTCCCGCCTTAGTGCCGCAAGAAAAAAGATAAAGGAGGCGGTGCTTATATACGAAGAAAACAACAACGACAGACTTCATGCTGTCGTGCCTGTATTTATTCTTTCAAAGCTTCTTAATAAAGAGGCTTCAAACACCGTTCTTCCGAAACTTACCGTTTTCACAGGCTCAGCCTCAGCCGCTAATGCAGTTCCCGATAGCGTAACATCAACAAAAACTATATCGGGAGGAAAAGGAATGTTTTCAACAGTAAAAGCAAAAGTAATAGCAGGCGTTTGTGCCGTGGCAGTTGTAGGCGGAGGTATCACAGCGGCGGTGATGCTCAGTTCAAATAATAGTGATGACGACGATAATAATGATATTGTTGTTGCTTCTTCACAAAATGACAGCACAGCTTCAAAGGGCGATGAAGACGTGTCTGATACCGCTAAGGATAACAAAGACAGCGACTTATATTGGATAGACAGCTTTCAGGGCGGCACGCCGTCAGATACTTTGCCGCAGGATATTTTCGGCAGCAAAATATCAGTGCCTGTTGACCTTAGTGCCATAGACGGCGGCAATGCCAATATGAAAATGTACGGCGACGATATTGGCAGATCTAGTGATATTATGAGCGTTGATAAAATGATAGGTGAAAACAGTGACGTTGAGATAACCTTCGTTTCATCAGATGAGAGCCAAACAAACTACGATCTTACCGGTGCAAACCCATTTGACCGTGACGCAAGTGTGGCTGACATTCTCAAGGAAAACAGCTGGAGCATTACCATACCTTTAGAAGAGGCTGTGGATACCTCCGGCTGGGAGTATGAAAGCTACGGCTGCTACAGCAATAAAGAAGATCTTGATAAAATAATCGACAAAATGGGCTGTCCTACAAGCATTTATATGGACAGCGAATATGACGGCATGGACGATTATAAATGCTATACAATGTATTGGGAGAACGTTGACTATACAATTTCACTCGGCGTGGTGGAAACATATAGTAATTACGAAGAGTATGACGTAGTGCTTGATTACTTCTCGGCTTTCGATTTCACATACTACAGCAAAAACTATCCGCAGGAAGAAATACACGAAAAAGACGGAGAGGCTGTTTTCACATCTGAGTACACAGGCATAACAACACCGGGCGAGAGCACTGTAAACACTGATGAGAACAGAGTAAAGGTATATGATGACCTCAAGGCACTTGACCTTACTTCAGACGCTGCTCTGCCTAAGGATATAAGCGTAAGCTATAAGGGCATAGACCACGTTTTCACAGGCACTGAGCTTATTGATGATGTAAGAGCAGAAATGGTGGATACCCCTGACGATGAATACGATTCTGCTCTTTGCTACGGAAAAACAAGCTCGACTATGGATAATATCATCATCTTCGACTTCTGGCTCAACAGCGATCATACCCTCCATGAGATAAGAATGAGTTTCGCCACCGAAAGCGACTGCTCAATATTCGGTATAACAAAAAATTCAACTCCTGAGGAGATGGCTGCGATTCTCGGCACACCTGAGGTCAGCGACAGAAACGGCAAAGATCAGTTTCTTGATTGGGAGAGCGATTCCATGAGCGTGAACGCATATTACTATGACGGCGTTTTGCAGTCTATACAGGCTAACTTTGAAAACTAG
PROTEIN sequence
Length: 710
MEKDDIKKLVLQAAQGNKAAFGALYEETGRTVYFSCLKLLGDPQLAEDITQETYLTALQKLGTLAQPENFPAWVNRIGINLCKMHFRNNSAPEDNSEEIIEEIPDEGLIPEEYVSNDAKRKIIMDIIDTVLTEEQRRSVILYYFDMLTVPEIAEVMNCTTGTVTSRLSAARKKIKEAVLIYEENNNDRLHAVVPVFILSKLLNKEASNTVLPKLTVFTGSASAANAVPDSVTSTKTISGGKGMFSTVKAKVIAGVCAVAVVGGGITAAVMLSSNNSDDDDNNDIVVASSQNDSTASKGDEDVSDTAKDNKDSDLYWIDSFQGGTPSDTLPQDIFGSKISVPVDLSAIDGGNANMKMYGDDIGRSSDIMSVDKMIGENSDVEITFVSSDESQTNYDLTGANPFDRDASVADILKENSWSITIPLEEAVDTSGWEYESYGCYSNKEDLDKIIDKMGCPTSIYMDSEYDGMDDYKCYTMYWENVDYTISLGVVETYSNYEEYDVVLDYFSAFDFTYYSKNYPQEEIHEKDGEAVFTSEYTGITTPGESTVNTDENRVKVYDDLKALDLTSDAALPKDISVSYKGIDHVFTGTELIDDVRAEMVDTPDDEYDSALCYGKTSSTMDNIIIFDFWLNSDHTLHEIRMSFATESDCSIFGITKNSTPEEMAAILGTPEVSDRNGKDQFLDWESDSMSVNAYYYDGVLQSIQANFEN*