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L2_019_061G1_scaffold_135_23

Organism: dasL2_019_061G1_metabat_metabat_16_fa_fa

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(26652..27524)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 290.0
  • Bit_score: 562
  • Evalue 2.60e-157
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 290.0
  • Bit_score: 248
  • Evalue 2.20e-63
UPI0003D62668 related cluster n=1 Tax=unknown RepID=UPI0003D62668 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 290.0
  • Bit_score: 562
  • Evalue 1.90e-157

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGACGGCTCGATTCGTTTACGCCTAGACCTGGCCTATCGAGGCGCGCCGTTTCACGGTTGGGCGCGCCAACCGGGACTCCTGACCGTCCAGGGACGCCTGGAAGAAGCGCTGAGTATGATTGCCCGCCAGCCGGCGCAGCTTACCGTGGCCGGGCGTACCGATGCGGGGGTGCATGCCCGCGGACAGGTTGCCCACTTGGACGTGATGAAAGACTTTTGGCTTTCCCTGTCCCGAGGGCGCGAAGAGAGCGACGAACTGCGCGGGGAACGGCTCCGGGCTCGTCTAGAAGGCCTCGCGGGACGCGGTTTGAACGGTGCTTTGGCAATAAAGCAGGTCAGGGTGGTATCTAAGGATTTCGATGCCCGTTTTTCGGCGCTGTCTCGTACTTATCGCTATCTGATTTGTGATGATCCCCGTGCCCAAGATCCTTGCCGCTTGGATATCGCCCGCACGTCCTCGCCCCTGGAAGAGGCAACAATGCAGGTGGCAGCGCAGGCGTTATGTGGCGAGCATGATTTTCTACCTTTTGCGAAACCTCGGGAGGGCGCGACTACAGTGCGCACGCTTCATTCCTTTAATATTTCCCGTCCCTACCCGGGAATAGTGCAAGCGATGATTCGCGCGGACGCGTTTTGTCACTCCCAAGTCAGGTTCATGATGGGAGCCTTAATCGAGATCGGGCGGGGTAAATATCAGCCTAACTGGGTAGGGGAGCTGCTAGCTGCGGGAGTACGTGACCAGCGGGTTCCGCTTGCCGATGGACGGGGTCTGACTCTTTGGGAGGTAGCCTATCCTCCGGAGGACGAATACGCCTTGCAAGCCCAAAAAGCCAAAGTAGTCCGTACCCTGCCCGAAAACTCGCCCTCTTAA
PROTEIN sequence
Length: 291
MDGSIRLRLDLAYRGAPFHGWARQPGLLTVQGRLEEALSMIARQPAQLTVAGRTDAGVHARGQVAHLDVMKDFWLSLSRGREESDELRGERLRARLEGLAGRGLNGALAIKQVRVVSKDFDARFSALSRTYRYLICDDPRAQDPCRLDIARTSSPLEEATMQVAAQALCGEHDFLPFAKPREGATTVRTLHSFNISRPYPGIVQAMIRADAFCHSQVRFMMGALIEIGRGKYQPNWVGELLAAGVRDQRVPLADGRGLTLWEVAYPPEDEYALQAQKAKVVRTLPENSPS*