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L2_039_362G1_scaffold_446_5

Organism: dasL2_039_362G1_concoct_14_sub_fa

near complete RP 44 / 55 BSCG 46 / 51 ASCG 11 / 38
Location: 8355..12239

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 1297.0
  • Bit_score: 2528
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 1294.0
  • Bit_score: 2256
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 1297.0
  • Bit_score: 2528
  • Evalue 0.0

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Taxonomy

Holdemanella biformis → Holdemanella → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3885
ATGAGTATTAACAATTTTGCCTCGATTCAGGTTCGCTTAGCGAGTCCAGAAACGATTTTAAAATGGAGTCATGGTGAAGTAACAAAGCCTGAGACAATTAACTATCGTTCACAAAAAGCAGAACGTGATGGTTTATTCTGCGAACGCATTTTCGGTCCAACTAAGGACTGGGAATGTGCTTGTGGTAAATATAAAAAAGTACGTTTTAAAGGTGTTGTATGTGACCGTTGTGGTGTAGAAATCACAAAAGCAAGCGTAAGACGTGAGCGTATGGGCCACATCCACTTAGCTGCACCAGTAGCTCATATTTGGTACTTACGTGGTATTCCTAGCCGTATGGCATTGTTGTTGGATGTAACACCAAAACAATTGGAAGAAGTTGTATATTTCGTAAGCTATATTGTTACGGATCCAAAAGAATCTGGTTTAGCTTACAAACAAATTCTTTCTGAACGTGAATTCCGTGAAAACCAAGCTATTTATGGTTCAACAGGATTTACAGCTCAAACAGGTGCTGAAGCCGTACTACGTTTATTACAAGATGTTGATTTAGAATCTGAATATCAAGAAGTACAGGATGCGCTTGAAAAAGCACAAGGTGAAAAACGTAAGAAATTAATCAAACGTTTGGATACAATCAATGCATTCCGTAATAGTGAAAACTTACCAGAATGGATGATTCTGACTAACATTCCGGTAATACCACCTGATTTACGTCCAATGCTTCAATTGGATGGTGGTCGTTTTGCGACAAGTGATTTGAACGACTTATATCGTCGTGTTATCACTCGTAACAATCGTTTACGTAAATTGTTAGATTTGGGTACTCCAAATATTATCGTTCAAAACGAAAAGCGTATGTTACAGGAATCTGTAGATGCTTTAATTGACAATGGTCGTCGTTCAAAACCAATTACAGGTGCTGGTGGACGTGCATTAAAATCATTGTCTCATTCATTAAAAGGTAAACAAGGTCGTTTCCGTCAGAACTTATTAGGTAAGCGTGTTGACTTCTCTGGTCGTTCTGTAATTGCCGTTGGACCAGATTTGAAAATGTACCAATGTGGTATTCCACGTGAAATGGCAGTAAACTTGTTTAAACCATTTATCATTAATGAAATCGTAAACCAAGGATTAGCACAAAATCCTAAAAATGCAGAAAAATTAATCGAACGTCGTGATCCTCGTATCTGGGACGTTGTTGAAACTGTAATCGACGGATATCCTGTATTAATGAACCGTGCACCTACATTACACCGTTTGGGTATTCAGGCCTTCTTGCCTAAATTAGTAGAAGGACGTGCAATGCGTCTTCACCCATTAGTATGTACTGCGTTCAACGCCGACTTCGATGGTGACCAGATGGCCATCCACGTTCCATTAGGAGAAGAAGCTCGTGCTGAAGCATTAGTTATGATGCTTGGTTCTCACAATATCTTAGGTCCTAAAGATGGTAAACCTATCGTTACGCCAGGACAGGATATGGTTATGGGTAACTTCTATTTAACAATGGAAGAAACAAAAGAAGAATTCTTTGCAGAAGCTAAACACTACGAAGAAGTTGGCTGCCCATTAGAAGCAGCTCACTGGCACCGTTTTGGTGAAAGTGAAGGGCATGTATACACAGATGAAGATGAAGTTATGATGGCATACCAGTCGAAACAAGTTCACCTTCACACTCGTATCGCATTGCCTGTATGCAATATGCATAAAACATCGTTTGATGAAAAACATAAAAATGATTATTTAATTACAACAGTTGGTAAGATTGTGTTCAACTCAATGTTCCCTGAAGATTTCCCATATATTAATGAGGTATCAAAAGAAAACTTTATTAGTACTCCTGATAAATACTTTATTGCTCCAGGACAAAACATTAAAGAATACATCGAAGCTATGCCTTTAGTTGAAGCGGTTAAGAAAAAAGATTTAGGTAAAGTTATTGCCGAAGTCTTCAAACGTTATGATGCGGATCAAACTGCTGAAATTCTTGACCAAATCAAATCTTTAGGATTTGAATATTCAACAGTAGCTGGTATTACAGTTGCCTTGTCAGATATCGAAGTGGCTCCTCACAAAGATGAATATATCGATGAGGGTCGTGTTAAAGCCGATCAGTTGAAACACTTACAACGTAAAGGTATGTTGACAATGGAAGAATGGGAACGTCACTTATCTAAGATGTGGGATGATCAAAAAGACAAGATCGTAACATCATTGATGAAAAACTTGCCTCGTAAAAACCCAATCAACATGATGGCGACTTCTGGTGCTCGTGGTAACGCGTCAAACTTTACTCAGTTAGCTGGTATGCGTGGCTTAATGGCAAAACCTGGCCACGCTAAAGCTGGTGCTGGTGAATATGTACCAACCATCATAGAAGTTCCTATCTACTCTTGTTTCCGTGAAGGATTGAACGTAAGTGAGTTCTTTATCTCGACTCACGGTGTGCGTAAAGGTCTTACAGATACTGCCTTAAAGACAGCCGAATCTGGTTACTTAACTCGTCGTTTGGTTGATGTTGCCCAAGATGTAATTATCAAAGAAGATGATTGTGGTACAGATAAGGGGTACTGGATCGAAACATTAATGGATCGTAAAACAAACTCTGTTATCGAACCATTACAAGATCGTTTAGTTGGTCGTTATTCTAAACAAGATGTAACAGATCCAAAGACAGGTGAAATAATTATTGCGAGTGATGAATTCATCACTGATGAACTTGCTAAGAAAATTGTAGATGCAGGTGTTACAGGTATGTATATCCGTTCTGTATTTACTTGTAAGTCCCGTTTAGGTATTTGTCGTAAATGTTATGGACGTAACATGGCTACTGGTAAAGACGTTGAAGTTGGTGAAGCTATTGGTATCATGGCGGCTCAATCAATTGGTGAACCAGGTACACAGTTAACAATGCGTACATTCCATACAGGTGGTGTTGCCGGTGCCGGTGCAGAAGATATCACTCAAGGTTTGCCTCGTGTTGAAGAATTATTCGAAGCTCGTTGTCCAAAAGGTGTTGCGGTAATTGCTCAGATTTCAGGTGAAATTACTTCAATTGAACGTATTGAAGGAACAATGCGCCAAGAAGTTATTATCACAAACGAACACGAAAGTGTTTCTCATAAAATCAACGCGAACCAGTCTATGCGTCCATGGGTTCAAGTCGGTGCAAAGATTGAAGCCGGTGTTGCGTTGACTGAAGGTCCATTAGATCCAAAAGAATTATTACGTGTTGCTGGTGTACGTGAAGTTCAAGACTATATCTTGAAGGAGGTTAAGAAAGTATACCAAAGCCAAGGTATCGAAATTAGTGATAAGCACTTGGAAGTAATGATCAAACAGATGATGAAGAAAGTAATCATTGTAGATAGTGGAGATACTGATTTAAATGTTGGTGTTCAATTATCATTGAATAACATCACAAAAATCAATCGTAACGCATTGTTAAGCGGTAAAACTCCTGCTACATTCAAACCAATATTATTAGGTATTTCTAAGTCTTCTGTTGAAACAGATTCCTTCTTATCAGCTGCTTCATTCCAGGAAACTACAAAGGTTCTTACAGATGCGACTATTAAGGGTAAAGTTGACCACTTAATCGGTTTGAAAGAAAATGTTATTATTGGTAAGCTGATTCCTGCAGGTACTGGATGCCAGGGAGATCGTCCACAAAATCTAATTGTTGCAGAAAAGGCTAAAGAACTTCGTGACAAACGTATTGCACGTATGAAAGAAGTTCATGATGAAGAGTTCGACAAACTAGTATCTGGCTCTGATGATAGAGATATGATGGATAGTGTAGAAGCTTCAGTAGAAGAATCAATTTTACAAGATGCAGATACTGCAGACAATAATTCAATGGATATCCAATCTGAAGAATAA
PROTEIN sequence
Length: 1295
MSINNFASIQVRLASPETILKWSHGEVTKPETINYRSQKAERDGLFCERIFGPTKDWECACGKYKKVRFKGVVCDRCGVEITKASVRRERMGHIHLAAPVAHIWYLRGIPSRMALLLDVTPKQLEEVVYFVSYIVTDPKESGLAYKQILSEREFRENQAIYGSTGFTAQTGAEAVLRLLQDVDLESEYQEVQDALEKAQGEKRKKLIKRLDTINAFRNSENLPEWMILTNIPVIPPDLRPMLQLDGGRFATSDLNDLYRRVITRNNRLRKLLDLGTPNIIVQNEKRMLQESVDALIDNGRRSKPITGAGGRALKSLSHSLKGKQGRFRQNLLGKRVDFSGRSVIAVGPDLKMYQCGIPREMAVNLFKPFIINEIVNQGLAQNPKNAEKLIERRDPRIWDVVETVIDGYPVLMNRAPTLHRLGIQAFLPKLVEGRAMRLHPLVCTAFNADFDGDQMAIHVPLGEEARAEALVMMLGSHNILGPKDGKPIVTPGQDMVMGNFYLTMEETKEEFFAEAKHYEEVGCPLEAAHWHRFGESEGHVYTDEDEVMMAYQSKQVHLHTRIALPVCNMHKTSFDEKHKNDYLITTVGKIVFNSMFPEDFPYINEVSKENFISTPDKYFIAPGQNIKEYIEAMPLVEAVKKKDLGKVIAEVFKRYDADQTAEILDQIKSLGFEYSTVAGITVALSDIEVAPHKDEYIDEGRVKADQLKHLQRKGMLTMEEWERHLSKMWDDQKDKIVTSLMKNLPRKNPINMMATSGARGNASNFTQLAGMRGLMAKPGHAKAGAGEYVPTIIEVPIYSCFREGLNVSEFFISTHGVRKGLTDTALKTAESGYLTRRLVDVAQDVIIKEDDCGTDKGYWIETLMDRKTNSVIEPLQDRLVGRYSKQDVTDPKTGEIIIASDEFITDELAKKIVDAGVTGMYIRSVFTCKSRLGICRKCYGRNMATGKDVEVGEAIGIMAAQSIGEPGTQLTMRTFHTGGVAGAGAEDITQGLPRVEELFEARCPKGVAVIAQISGEITSIERIEGTMRQEVIITNEHESVSHKINANQSMRPWVQVGAKIEAGVALTEGPLDPKELLRVAGVREVQDYILKEVKKVYQSQGIEISDKHLEVMIKQMMKKVIIVDSGDTDLNVGVQLSLNNITKINRNALLSGKTPATFKPILLGISKSSVETDSFLSAASFQETTKVLTDATIKGKVDHLIGLKENVIIGKLIPAGTGCQGDRPQNLIVAEKAKELRDKRIARMKEVHDEEFDKLVSGSDDRDMMDSVEASVEESILQDADTADNNSMDIQSEE*