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cn_combo_scaffold_448_3

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: comp(3317..3718)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Caulobacter RepID=UPI000374BA69 similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 130.0
  • Bit_score: 102
  • Evalue 2.40e-19
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:KGB52711.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 132.0
  • Bit_score: 161
  • Evalue 1.10e-36
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 130.0
  • Bit_score: 101
  • Evalue 2.00e-19

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGACGCAGGAGGTATTCGCCCGTCTCGCCCAAACACGCACCGATCATGTCGATTCGACCGAAGCGTTCATTTTCCGCATCGCGACGAACTTGCTCCGCGACCATCAGCGCAGCAATCGCTCCCGCTTCGCCGCGCATCAGGCGATGCGGCTGGACGAGGAACAGGGCATTGACCCGCTCGACCCGCACCGGATCGCCGCCGCGCGCGAGACGATCGGGGCGCTTTGGGCCGCCGTTCAGGCGCTACCCGAACCGACCCAGCAGATTTTCATCCTCTACCGCGTCGAGAATATCGCCAAGCAGGTGATCGCCGACAACTTCGGCTTCAACGTGCGGACGGTCGAAAAGCATATTTCGCGCGCCATGGTGTTCCTTGCCCGCCGTATCGGAGGGCGAAGCTGA
PROTEIN sequence
Length: 134
MTQEVFARLAQTRTDHVDSTEAFIFRIATNLLRDHQRSNRSRFAAHQAMRLDEEQGIDPLDPHRIAAARETIGALWAAVQALPEPTQQIFILYRVENIAKQVIADNFGFNVRTVEKHISRAMVFLARRIGGRS*