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cn_combo_scaffold_448_16

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: comp(16650..17144)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNW0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 164.0
  • Bit_score: 299
  • Evalue 2.80e-78
RNA-binding protein Hfq {ECO:0000256|SAAS:SAAS00067493}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 162.0
  • Bit_score: 304
  • Evalue 7.30e-80
hfq; RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 164.0
  • Bit_score: 299
  • Evalue 8.00e-79

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
GTGTCCGATAAAACCCAGAATCTTCAAGATCTTTTCCTAAACGCCCTGCGCCGCAGCAAGACCCCGGTGACGATGTTCCTCGTCAAGGGCGTCAAGCTTCAGGGGATCATCACCTGGTTCGACAATTTCTCGCTGCTGCTCCGCCGCGACGGGCAGTCGCAGCTTGTCTACAAGCATGCGATCTCGACGATCATGCCGTCGCACGATTTCGACCTGGCGCTGCTCGGCGACAATGTCCGCGACGCGCCGCCCAGCAAGGGGAAGGCGTTGCAGGACGTGTTCCTGAACGCGGTGCGCCGGTCCGAGGAATCGGTGACGATGTTCCTCGTCAACGGCGTGATGCTGCAGGGCGACATCGTCGCTTTCGACCTGTTCTGCATGCTGCTCGAGCGCGAACGGCAGGTTCAGCTCGTCTACAAGCATGCGATTTCGACGGTGCAGCCGAACGGTCCGATCAATCTGGCCGACAGCGGGGAAGGCGACTCCGGCGACTGA
PROTEIN sequence
Length: 165
VSDKTQNLQDLFLNALRRSKTPVTMFLVKGVKLQGIITWFDNFSLLLRRDGQSQLVYKHAISTIMPSHDFDLALLGDNVRDAPPSKGKALQDVFLNAVRRSEESVTMFLVNGVMLQGDIVAFDLFCMLLERERQVQLVYKHAISTVQPNGPINLADSGEGDSGD*