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cn_combo_scaffold_942_12

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: 10085..10702

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB99 similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 200.0
  • Bit_score: 138
  • Evalue 1.00e-29
Uncharacterized protein {ECO:0000313|EMBL:EQB06172.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 180.0
  • Bit_score: 133
  • Evalue 2.80e-28
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 184.0
  • Bit_score: 112
  • Evalue 1.30e-22

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Taxonomy

Sphingobium baderi → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGCCGGCCGTGGATGACGATTTCGGGCAACGCAACAAATGGCTGGCACGCCATGTCCTTCCGCGGGAAGGTGCGTTGCGCGCCGCGATCGCGCGCTGGCGCTTGCCCGACGGCGTCGATGCCGATGACATTGTCCAGGAAGTCTTCGGGAATCTGGCGGAGGTCGACGACCATGCCGCCATCCGCAACGTCGGCGCCTATATGCGCGGCATCGCGCGGAACATCGTTCTTGCCTACTGGCGTCGGTCGCGGGTCGTATCGATCCAGGCCGTCGAAGATCTGGAGCAACTGGCGATTCCGTCCGACGAGGCGTGGGTTGACGAACAGGTATCGGATCGTCAGCAGCTCCACAGGCTCGCCCTCGCCGTCGGCGAACTGGAAGAGCCGGGACGGTCGATCTTTTTGCTGCGTTTCGTCGAGGAGATGACGCAAAGAGAGATTGCGGACCGACTGAGCATCAGCGAGGATCGCGTCCAGCGCAGTCTCGTGGCGATGCTGGTCGATCTGGCGGCTTTGCTCGGTCGGCGCGGAAAACGACCCCGTCGCGCATCTCATAGGGGGACGGCCGTCTTGGCAGGTGAAGGTGATGGAACGGCGCGAGTCGAGCGCAGAGATTGA
PROTEIN sequence
Length: 206
MPAVDDDFGQRNKWLARHVLPREGALRAAIARWRLPDGVDADDIVQEVFGNLAEVDDHAAIRNVGAYMRGIARNIVLAYWRRSRVVSIQAVEDLEQLAIPSDEAWVDEQVSDRQQLHRLALAVGELEEPGRSIFLLRFVEEMTQREIADRLSISEDRVQRSLVAMLVDLAALLGRRGKRPRRASHRGTAVLAGEGDGTARVERRD*