ggKbase home page

cn_combo_scaffold_997_28

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: comp(24591..25463)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigJ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWP8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 284.0
  • Bit_score: 483
  • Evalue 1.10e-133
RNA polymerase sigma factor SigJ {ECO:0000313|EMBL:ENY82870.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 284.0
  • Bit_score: 483
  • Evalue 1.50e-133
RNA polymerase sigma factor SigJ similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 291.0
  • Bit_score: 472
  • Evalue 9.30e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGCCGGACGCGGGCATCTCCGGTGTGGCGGCGGCGGATGCGGCAGCAAGTTTCGACCCGCTGCGGCCGCTGCTGACCCGCGTCGCCTATCGCATGCTCGGTTCGGTCGCCGATGCCGAGGATGTGGTGCAGGATGCCTTCCTCCGCTGGCTCGGCACCGACCGCGCGGCGGTCGAGGCGCCGGCGGCGTGGCTGCGCCGCACCGTGACGCGGCTGTGCCTCGACCAGCTTAAGTCGGCGCGGCGCCAGCGCGAGACCTATATCGGACCGTGGCTGCCCGATCCGCTCGTCGAGGAAGCGGCCGACGACGATGTCACGCTGCCGCTGATGCTCGCGCTCGAACGGCTCTCCCCCCTCGAACGCGCGGCCTTCCTGCTGCACGACGTCTTTGGCGTCGGCTTCGACGAGGTCGCGGCGACGATCGGCCGCGACGCCGCCGCGACGCGCCAGCTCGCCGCGCGGGCGCGCAGGCACGTCCGCGAGGCGCGCCCGCGCTACAGGCTCGAAAGCGAGCAGGGGCTCGCGATCGCCAACGCCTTCTTCGCCGCGTCGCGCGGCGGCGACATGGAGGCGTTGGGCACGCTGCTTGCGGCGGATGTCGGGCTGTGGTCCGACGGCGGCGGCAAGCGTCCCGCGGCGATGGTGCCGGTGCTCGGCTTCGCGCATGTGATGCGGGTGCATCGCAGCCTCGCCGTGCTGTTCGCCAAACATGCCTCGACGCTGGTCCATGTCGGGACGATCAACGGATTGCCCGGCTTCGTCACCCGCGAAGCCGACGGCGAATATCAGACCACGGCGCTGGAGGTCGAGGCGGGGAAGGTCGTTGCCATCTATGTGATGCGCAACCCCGACAAGCTGAAGCATATGCATTAG
PROTEIN sequence
Length: 291
MPDAGISGVAAADAAASFDPLRPLLTRVAYRMLGSVADAEDVVQDAFLRWLGTDRAAVEAPAAWLRRTVTRLCLDQLKSARRQRETYIGPWLPDPLVEEAADDDVTLPLMLALERLSPLERAAFLLHDVFGVGFDEVAATIGRDAAATRQLAARARRHVREARPRYRLESEQGLAIANAFFAASRGGDMEALGTLLAADVGLWSDGGGKRPAAMVPVLGFAHVMRVHRSLAVLFAKHASTLVHVGTINGLPGFVTREADGEYQTTALEVEAGKVVAIYVMRNPDKLKHMH*