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cn_combo_scaffold_1189_1

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: comp(37..663)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RL4_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 208.0
  • Bit_score: 394
  • Evalue 6.30e-107
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 208.0
  • Bit_score: 396
  • Evalue 1.80e-107
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 208.0
  • Bit_score: 394
  • Evalue 1.80e-107

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Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAAGGTCAAGGTTCAGACCCTCGATGGCAAGGCTGGCGCCGACATCGACCTCAACGACGACGTCTTCGGCGTCGATGCGCGTGCGGACATCCTGCACCGCGTCGTCGCCTGGCAGCTCGAGAAGCGCCGCGGCCCCGCCCGCGCCGCCCGCGAGCGCAGCGAAGTCGCCCGCACCGGCAAGAAGTTCGGTCGCCAGAAGGGCGGCGGCACCGCGCGTCACGGCGATCGCAAGGCGCCGATCTTCATCGGCGGCGGCAAGGCGCACGGCCCGCGGGCCCGCACCTTCGGCCATTCGCTGAACAAGAAGATCCGCACCCTCGGCCTGAAGATGGCGCTCAGCGACAAGGCGAAGGGCGGCAAGCTCGTCGTCCTCGACACGCTCGAGCTCAAGGATGCCAAGACCAAGGCGCTCGCCGGCAAGCTCGGCAAGCTGGAGCTTGGCGGCCGCGCGCTCTTCATCGACGGCGACGCCGTGCATGAGAGCTTCGTTCAGGCTTCGGCCAACATCGTCGGCGTCGATGCGCTGCCGGCGATCGGGGCCAATGTCTATGACATCATCCGTGCCGACACGCTGGTCCTGACCCGCGCGGCGGTCGAAAAGCTGGAGGCCCGCTGCAATGGCTAA
PROTEIN sequence
Length: 209
MKVKVQTLDGKAGADIDLNDDVFGVDARADILHRVVAWQLEKRRGPARAARERSEVARTGKKFGRQKGGGTARHGDRKAPIFIGGGKAHGPRARTFGHSLNKKIRTLGLKMALSDKAKGGKLVVLDTLELKDAKTKALAGKLGKLELGGRALFIDGDAVHESFVQASANIVGVDALPAIGANVYDIIRADTLVLTRAAVEKLEARCNG*