ggKbase home page

cn_combo_scaffold_1973_22

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: comp(24066..24344)

Top 3 Functional Annotations

Value Algorithm Source
Putative AlpA family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL30_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 67.0
  • Bit_score: 124
  • Evalue 5.40e-26
putative AlpA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 67.0
  • Bit_score: 124
  • Evalue 1.50e-26
Putative AlpA family transcriptional regulator {ECO:0000313|EMBL:BAK67582.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 67.0
  • Bit_score: 124
  • Evalue 7.50e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
TTGCAAGACGAAGCCGACCATCCAAAATCTTTCCCAGGGAGCTTCGTCAGCCACCAGATGATGAAAGAATATCCCGTGCCTCACCCTGAACGGATCATACGCCTCAAGACGGTGCTGCATCGCACCGGACTTTCCCGCTCCACCCTCTACCGCAAGATCGCGGAAGGCAGCTTTCCCCGGCAAATCACAATCAGCATCCACGGCACCGGCTGGCATGAATCCGCCGTGGATCGCTGGATCGCCAACCCCGCCGCTTTCCGTGAAGATCGCGCCGAATGA
PROTEIN sequence
Length: 93
LQDEADHPKSFPGSFVSHQMMKEYPVPHPERIIRLKTVLHRTGLSRSTLYRKIAEGSFPRQITISIHGTGWHESAVDRWIANPAAFREDRAE*