ggKbase home page

cn_combo_scaffold_1409_24

Organism: CN-SCN_Sphingopyxis_31x

megabin RP 48 / 55 MC: 32 BSCG 47 / 51 MC: 31 ASCG 12 / 38 MC: 5
Location: 20971..21666

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A68C53 similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 223.0
  • Bit_score: 377
  • Evalue 8.90e-102
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:KGB58941.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 230.0
  • Bit_score: 378
  • Evalue 9.50e-102
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 231.0
  • Bit_score: 374
  • Evalue 2.80e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
TTGGAGTCCAAGGCAAAGAGTCGGACGAAACGGCCATCGAAAGCGGAGCAGCGCGCCGAAACGATCGAGCAGATTCTCGACACCGCCGAATATCTCTTTTCGCGCAACGGACTCTACGGGGTGACGCTCAAGGATGTCGCCAAGCGGGTGGGCGTGCATCACACGCTGCTCAACTATTATTTCGAGGACAAGAAGAAGCTGTTCGATGCGGTGTTCGCCCGCCGCGCGGTGGTGACGAGCGAGCGCCGCATGAAGGTGCTCGACGATTACGAGCGGGCGTCGGGGGGAAAGCCGACGATCGAGGGCGCGCTCCATGCCTTTCTGGACACCGACCTCGACCTTTATATCGAGGGTGGCGAGGGCTGGCGCAACTATGGGGCGCTCAGCGCGCAGGTGGCCAACACGCCCGAATGGGGCGCCGGGATGATGGACGCCCATTTCGACCCGGTCGTGCTGCGGCTGATCGGCATATTGAAGAAGGCGCTGCCAGAGGCGGCGGAGGAAGACATCTTCTGGGGCTATCACTTCGTCACCGGGGCGCTGATGCTGACGCTCGCGCGCACCGGCCGCATCGACAAATTGTCGCAGGGGCTCTGCCGGTCGGACGATTATGCGGCGGTCAAGCAGCGCATGGCGCGCTTCATGGCGGCGGGCTTTCGCGATATCTGCGAACAGCGCGCGAAAGACGGGGACTAG
PROTEIN sequence
Length: 232
LESKAKSRTKRPSKAEQRAETIEQILDTAEYLFSRNGLYGVTLKDVAKRVGVHHTLLNYYFEDKKKLFDAVFARRAVVTSERRMKVLDDYERASGGKPTIEGALHAFLDTDLDLYIEGGEGWRNYGALSAQVANTPEWGAGMMDAHFDPVVLRLIGILKKALPEAAEEDIFWGYHFVTGALMLTLARTGRIDKLSQGLCRSDDYAAVKQRMARFMAAGFRDICEQRAKDGD*