ggKbase home page

L2_040_124G1_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_210_1
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56..487
DNA (432bp) protein (144aa)
MarR family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W392_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48633.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L2_040_124G1_scaffold_210_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

501..1331
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W2H2_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK47276.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L2_040_124G1_scaffold_210_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1539..1991)
DNA (453bp) protein (151aa)
Putative Acyl-CoA N-acyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0R6_CLOA9
Acetyltransferase family protein {ECO:0000313|EMBL:KIE46609.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Acyl-CoA N-acyltransferase
L2_040_124G1_scaffold_210_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2602..5538
DNA (2937bp) protein (979aa)
Protein HypA n=1 Tax=Clostridium ultunense Esp RepID=M1ZCK9_9CLOT
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:KIE46548.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
zinc-dependent peptidase
L2_040_124G1_scaffold_210_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5825..7222
DNA (1398bp) protein (466aa)
multidrug transporter MATE n=1 Tax=Clostridium tunisiense RepID=UPI0002EE246A
MATE efflux family protein {ECO:0000313|EMBL:KIE46806.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
MATE efflux family protein
L2_040_124G1_scaffold_210_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7806..9179)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FR76_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:KIE46529.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
MATE efflux family protein
L2_040_124G1_scaffold_210_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9736..10767
DNA (1032bp) protein (344aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T8R7_CLOSG
Bacterial regulatory, arsR family protein {ECO:0000313|EMBL:KIE46775.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_210_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11043..12722
DNA (1680bp) protein (560aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SWS2_CLOSG
ABC transporter family protein {ECO:0000313|EMBL:KIE46561.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter ATP-binding protein/permease
L2_040_124G1_scaffold_210_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13069..15597
DNA (2529bp) protein (843aa)
DNA/RNA helicase n=1 Tax=Clostridium tetani 12124569 RepID=U6ETG0_CLOTA
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:KIE46696.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
DNA/RNA helicase
L2_040_124G1_scaffold_210_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15677..15991)
DNA (315bp) protein (105aa)
Conserved protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q897S1_CLOTE
Putative phosphoribosyl-ATP pyrophosphohydrolase {ECO:0000313|EMBL:KIE46650.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_210_11
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16273..18690
DNA (2418bp) protein (806aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPH7_CLOPF
hypothetical protein
L2_040_124G1_scaffold_210_12
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18641..21301
DNA (2661bp) protein (887aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPH8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV62408.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
L2_040_124G1_scaffold_210_13
Geobacillus sp. G1w1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21288..23075
DNA (1788bp) protein (596aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1430331 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. G1w1.;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPH9_CLOPF
hypothetical protein
L2_040_124G1_scaffold_210_14
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23868..24140
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPI4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:CDE68436.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L2_040_124G1_scaffold_210_15
unknown

Not on your lists

24230..24421
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPI4_CLOPF
L2_040_124G1_scaffold_210_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24709..25911
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LY62_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR35292.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_040_124G1_scaffold_210_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25865..26824
DNA (960bp) protein (320aa)
AAA ATPase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LY61_CLOB8
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:ABR35291.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_040_124G1_scaffold_210_18
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26829..27254
DNA (426bp) protein (142aa)
HNH endonuclease n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LY60_CLOB8
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ABR35290.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_040_124G1_scaffold_210_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27904..28443
DNA (540bp) protein (180aa)
Rubrerythrin n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I374_CLOCE
Rubrerythrin family protein {ECO:0000313|EMBL:KIE46659.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
rubrerythrin
L2_040_124G1_scaffold_210_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28498..29910)
DNA (1413bp) protein (471aa)
Rubredoxin family protein n=12 Tax=Clostridium difficile RepID=T3PCK7_CLODI
IMP dehydrogenase / GMP reductase domain protein {ECO:0000313|EMBL:KIE46607.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
oxidative stress protein
L2_040_124G1_scaffold_210_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30217..32181
DNA (1965bp) protein (655aa)
GTP-binding elongation factor, TetM/TetO family n=2 Tax=Clostridium botulinum A RepID=A5I3M5_CLOBH
Small GTP-binding domain protein {ECO:0000313|EMBL:KIE46656.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
tet(M); tetracycline resistance protein
L2_040_124G1_scaffold_210_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32512..33459)
DNA (948bp) protein (316aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z837_9CLOT
Voltage-dependent anion channel family protein {ECO:0000313|EMBL:KIE46681.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
C4-dicarboxylate transporter/malic acid transport protein
L2_040_124G1_scaffold_210_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33474..33947)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289CA70
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:KIE46700.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
C_GCAxxG_C_C family protein
L2_040_124G1_scaffold_210_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34527..35531
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N3M5_9CLOT
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:KIE46624.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_210_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35915..37057
DNA (1143bp) protein (381aa)
Alcohol dehydrogenase, iron-dependent n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZW88_CLOB0
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:KIE46594.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
alcohol dehydrogenase, iron-dependent
L2_040_124G1_scaffold_210_26
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37868..38104
DNA (237bp) protein (79aa)
Transposase IS200/IS605 family n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4Z6A7_PAEAL
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02796.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
L2_040_124G1_scaffold_210_27
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38294..38920
DNA (627bp) protein (209aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A3T3_CLOBO
MerR regulatory family protein {ECO:0000313|EMBL:KIE46632.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
MerR family transcriptional regulator
L2_040_124G1_scaffold_210_28
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39402..40499
DNA (1098bp) protein (366aa)
Choline permease LicB n=1 Tax=Clostridium botulinum A1 str. CFSAN002368 RepID=S8B4D1_CLOBO
Multidrug resistance efflux transporter family protein {ECO:0000313|EMBL:KIE46567.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_210_29
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40500..40766
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289A6FB
Uncharacterized protein {ECO:0000313|EMBL:KIE46599.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_210_30
unknown

Not on your lists

comp(40756..40935)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

View Taxonomy