ggKbase home page

L2_040_124G1_scaffold_322

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_322_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..481
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002899765
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:KIE48273.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glycoside hydrolase family 18
L2_040_124G1_scaffold_322_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

607..2016
-----------------
DNA (1410bp)
protein (470aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DD9DE6
Uncharacterized protein {ECO:0000313|EMBL:KIE48236.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_322_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2311..2781
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002887CD7
Uncharacterized protein {ECO:0000313|EMBL:KIE48261.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_322_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2917..5259
-----------------
DNA (2343bp)
protein (781aa)
glycoside hydrolase family protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002881326
Glycosyl hydrolases 25 family protein {ECO:0000313|EMBL:KIE48222.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glycoside hydrolase
L2_040_124G1_scaffold_322_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5483..6652)
-----------------
DNA (1170bp)
protein (390aa)
Putative phosphohydrolase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K8Q2_CLOPA
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:KIE48215.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative phosphohydrolase
L2_040_124G1_scaffold_322_6
unknown

Not on your lists

6714..6845
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

L2_040_124G1_scaffold_322_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6808..7296
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE48296.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_322_8
unknown

Not on your lists

7789..7971
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

L2_040_124G1_scaffold_322_9
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8331..8822
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MUF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86234.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
acetyltransferase
L2_040_124G1_scaffold_322_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8846..9601
-----------------
DNA (756bp)
protein (252aa)
Dinuclear metal center protein, YbgI family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DBK1_9FIRM
Dinuclear metal center protein, YbgI family {ECO:0000313|EMBL:ERI93693.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
SMS protein
L2_040_124G1_scaffold_322_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9707..10090
-----------------
DNA (384bp)
protein (128aa)
Glyoxalase/bleomycin resistance protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CCC0_9CLOT
Glyoxalase/bleomycin resistance protein {ECO:0000313|EMBL:EOR27029.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
glyoxalase/bleomycin resistance protein
L2_040_124G1_scaffold_322_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10171..10839
-----------------
DNA (669bp)
protein (223aa)
Putative UDP-N-acetylglucosamine diphosphorylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5Z6_9CLOT
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:KIE48292.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_322_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10933..11793
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DCN8_9FIRM
Acetyltransferase domain protein {ECO:0000313|EMBL:KIE48233.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_322_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11894..12481
-----------------
DNA (588bp)
protein (196aa)
Acetyltransferase, GNAT family n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C897_9FIRM
Acetyltransferase family protein {ECO:0000313|EMBL:KIE48243.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
GNAT family acetyltransferase
L2_040_124G1_scaffold_322_15
unknown

Not on your lists

12520..12660
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

L2_040_124G1_scaffold_322_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12682..13275
-----------------
DNA (594bp)
protein (198aa)
Shikimate kinase n=1 Tax=Clostridium sp. BL8 RepID=T0N3E2_9CLOT
AAA domain protein {ECO:0000313|EMBL:KIE48259.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
shikimate kinase
L2_040_124G1_scaffold_322_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13321..13509
-----------------
DNA (189bp)
protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE48265.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_322_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13911..15317
-----------------
DNA (1407bp)
protein (469aa)
Amino acid carrier protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H381_9CLOT
Amino acid carrier family protein {ECO:0000313|EMBL:KIE48226.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
amino acid carrier protein AlsT
L2_040_124G1_scaffold_322_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15622..17325
-----------------
DNA (1704bp)
protein (568aa)
ABC transporter transmembrane region n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KTA3_CLOPH
ABC transporter family protein {ECO:0000313|EMBL:KIE48244.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter
L2_040_124G1_scaffold_322_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17382..19124
-----------------
DNA (1743bp)
protein (581aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium COE1 RepID=R9KJ74_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:KIE48282.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter
L2_040_124G1_scaffold_322_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19329..19829
-----------------
DNA (501bp)
protein (167aa)
Isopentenyldiphosphate isomerase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K4Q6_CLOPA
NUDIX domain protein {ECO:0000313|EMBL:KIE48298.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
isopentenyldiphosphate isomerase
L2_040_124G1_scaffold_322_22
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19891..20139
-----------------
DNA (249bp)
protein (83aa)
Carboxymuconolactone decarboxylase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSS4_9CLOT
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EET87753.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Carboxymuconolactone decarboxylase
L2_040_124G1_scaffold_322_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20443..22242
-----------------
DNA (1800bp)
protein (600aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003053351
Oligoendopeptidase F {ECO:0000313|EMBL:KIE48253.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
pepF; oligoendopeptidase F
L2_040_124G1_scaffold_322_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22458..22925
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028927CF
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:KIE48257.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_322_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23311..23820
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PGY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE48202.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_322_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23833..25434
-----------------
DNA (1602bp)
protein (534aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PAP4_9CLOT
Carbon starvation CstA family protein {ECO:0000313|EMBL:KIE48193.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
carbon starvation protein CstA
L2_040_124G1_scaffold_322_27
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25674..27722
-----------------
DNA (2049bp)
protein (683aa)
methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002888B2F
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:KIE48223.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
methyl-accepting chemotaxis protein
L2_040_124G1_scaffold_322_28
unknown

Not on your lists

27765..27896
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

L2_040_124G1_scaffold_322_29
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28028..30052
-----------------
DNA (2025bp)
protein (675aa)
methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002888B2F
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:KIE48288.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
methyl-accepting chemotaxis protein
L2_040_124G1_scaffold_322_30
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30334..30690
-----------------
DNA (357bp)
protein (119aa)
ArsR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI00028856D8
Bacterial regulatory, arsR family protein {ECO:0000313|EMBL:KIE48206.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transcriptional regulator, ArsR family
Displaying items 1-30 of 39 in total

View Taxonomy