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L2_040_124G1_scaffold_456

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_456_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(455..1609)
-----------------
DNA (1155bp)
protein (385aa)
Glycerate kinase family protein {ECO:0000313|EMBL:KIE44720.1}; EC=2.7.1.31 {ECO:0000313|EMBL:KIE44720.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=2 Tax=Clostridium botulinum B RepID=B2TRW9_CLOBB
L2_040_124G1_scaffold_456_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1628..2881)
-----------------
DNA (1254bp)
protein (418aa)
Probable gluconate permease n=8 Tax=Clostridium perfringens RepID=Q8XM30_CLOPE
Citrate transporter family protein {ECO:0000313|EMBL:KIE45053.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
permease
L2_040_124G1_scaffold_456_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3223..5775
-----------------
DNA (2553bp)
protein (851aa)
Rubredoxin/flavodoxin/oxidoreductase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMC1_CLOPA
Flavo-diiron protein FprA1 {ECO:0000313|EMBL:KIE44658.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative flavoprotein
L2_040_124G1_scaffold_456_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5823..6257)
-----------------
DNA (435bp)
protein (145aa)
single-stranded DNA-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002899665
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
single-strand binding protein family
L2_040_124G1_scaffold_456_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6975..9026)
-----------------
DNA (2052bp)
protein (684aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
resE3; sensor histidine kinase ResE (EC:2.7.13.3)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000308F07C
L2_040_124G1_scaffold_456_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9277..10293
-----------------
DNA (1017bp)
protein (339aa)
transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI000287D157
Cell envelope-related function transcriptional attenuator common domain protein {ECO:0000313|EMBL:KIE45288.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transcriptional regulator
L2_040_124G1_scaffold_456_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10394..11257)
-----------------
DNA (864bp)
protein (288aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sp. BL8 RepID=T0N3E3_9CLOT
L2_040_124G1_scaffold_456_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11276..12211)
-----------------
DNA (936bp)
protein (312aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:KIE44776.1}; EC=5.3.1.8 {ECO:0000313|EMBL:KIE44776.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
manA; mannose-6-phosphate isomerase ManA (EC:5.3.1.8)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002FDEAD9
L2_040_124G1_scaffold_456_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12422..13258)
-----------------
DNA (837bp)
protein (279aa)
ribonuclease BN (EC:3.1.-.-)
ribonuclease BN n=1 Tax=Clostridium sp. JC122 RepID=UPI0002893A8B
YihY family inner membrane domain protein {ECO:0000313|EMBL:KIE45003.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_456_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13487..14314
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030C662C
Carbon-nitrogen hydrolase family protein {ECO:0000313|EMBL:KIE44547.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L2_040_124G1_scaffold_456_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14557..15942
-----------------
DNA (1386bp)
protein (462aa)
radical SAM protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A2FEB
Radical SAM superfamily protein {ECO:0000313|EMBL:KIE44926.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
radical SAM superfamily protein
L2_040_124G1_scaffold_456_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16457..16633
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NS47_9CLOT
Winged helix-turn-helix DNA-binding family protein {ECO:0000313|EMBL:KIE44766.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
HTH domain-containing protein
L2_040_124G1_scaffold_456_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16842..17840
-----------------
DNA (999bp)
protein (333aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T2XVV5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KIE45014.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_456_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17979..18938)
-----------------
DNA (960bp)
protein (320aa)
Putative membrane protein {ECO:0000313|EMBL:KIE44472.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_456_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18928..19812)
-----------------
DNA (885bp)
protein (295aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum C str. Stockholm RepID=F7MN41_CLOBO
ABC transporter family protein {ECO:0000313|EMBL:KIE44788.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter ATP-binding protein
L2_040_124G1_scaffold_456_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19796..20194)
-----------------
DNA (399bp)
protein (133aa)
GntR family transcriptional regulator n=1 Tax=Clostridium tetani 12124569 RepID=U6EZH7_CLOTA
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:KIE44443.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
gntR_6; GntR family transcriptional regulator
L2_040_124G1_scaffold_456_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20524..21381
-----------------
DNA (858bp)
protein (286aa)
Dissimilatory sulfite reductase (Desulfoviridin), alpha and beta subunits n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZR02_CLOB0
Nitrite/Sulfite reductase ferredoxin-like half domain protein {ECO:0000313|EMBL:KIE45078.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L2_040_124G1_scaffold_456_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21548..22540)
-----------------
DNA (993bp)
protein (331aa)
Cellulase (EC:3.2.1.4)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D283A2
M42 glutamyl aminopeptidase family protein {ECO:0000313|EMBL:KIE44787.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_456_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22553..23584)
-----------------
DNA (1032bp)
protein (344aa)
aminopeptidase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289DD35
M42 glutamyl aminopeptidase family protein {ECO:0000313|EMBL:KIE44822.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Endoglucanase, aminopeptidase M42 family
L2_040_124G1_scaffold_456_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23575..24615)
-----------------
DNA (1041bp)
protein (347aa)
aminopeptidase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A405B
Tetrahedral aminopeptidase {ECO:0000313|EMBL:KIE44846.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
aminopeptidase
L2_040_124G1_scaffold_456_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24730..25362)
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000382658A
Uncharacterized protein {ECO:0000313|EMBL:KIE44740.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_456_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25670..26347)
-----------------
DNA (678bp)
protein (226aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000365F4E8
Zinc-ribbon domain protein {ECO:0000313|EMBL:KIE44438.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein DUF2628
L2_040_124G1_scaffold_456_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26536..27387
-----------------
DNA (852bp)
protein (284aa)
Sulfite/nitrite reductase family protein n=4 Tax=Clostridium botulinum RepID=C1FNR8_CLOBJ
Nitrite/Sulfite reductase ferredoxin-like half domain protein {ECO:0000313|EMBL:KIE45231.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
nitrite and sulphite reductase 4Fe-4S region
L2_040_124G1_scaffold_456_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27528..29453)
-----------------
DNA (1926bp)
protein (642aa)
Chitinase B n=2 Tax=Clostridium botulinum B RepID=B2TS53_CLOBB
Carbohydrate binding domain protein {ECO:0000313|EMBL:KIE44458.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
chitinase B
Displaying 24 items

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