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L2_040_124G1_scaffold_506

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_506_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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440..880
DNA (441bp) protein (147aa)
carboxyl-terminal protease (EC:3.4.21.102)
Cell wall hydrolyse n=1 Tax=Paenibacillus popilliae ATCC 14706 RepID=M9LHV4_PAEPP
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:KIE45018.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_506_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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917..1321
DNA (405bp) protein (135aa)
Glycoside hydrolase family 25 n=1 Tax=Thermoanaerobacterium phage THSA-485A RepID=I3VYU7_9CAUD
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:KIE45294.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
peptidoglycan-binding domain 1 protein
L2_040_124G1_scaffold_506_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1606..2388)
DNA (783bp) protein (261aa)
Iron compound ABC transporter ATP-binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2N5C9_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:KIE45191.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter
L2_040_124G1_scaffold_506_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2401..3423)
DNA (1023bp) protein (341aa)
iron ABC transporter permease n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI000316A88F
Iron-uptake system permease protein feuC {ECO:0000313|EMBL:KIE45021.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transport system permease
L2_040_124G1_scaffold_506_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3416..4423)
DNA (1008bp) protein (336aa)
Iron-uptake system permease protein FeuB n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X9G2_ANEAE
Iron-uptake system permease protein feuB {ECO:0000313|EMBL:KIE44610.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transporter permease
L2_040_124G1_scaffold_506_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4444..5421)
DNA (978bp) protein (326aa)
Periplasmic binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2NP93_9CLOT
Iron-uptake system-binding protein {ECO:0000313|EMBL:KIE44804.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
periplasmic binding protein
L2_040_124G1_scaffold_506_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6010..6366)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMJ6_CLOPA
YjbR family protein {ECO:0000313|EMBL:KIE44297.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_506_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6468..6620)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MZ23_9CLOT
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:KIE45283.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
zinc-dependent hydrolase
L2_040_124G1_scaffold_506_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6973..7167
DNA (195bp) protein (65aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUP3_9CLOT
Helix-turn-helix domain protein {ECO:0000313|EMBL:KIE44771.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
arabinose operon regulatory protein
L2_040_124G1_scaffold_506_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7602..8507)
DNA (906bp) protein (302aa)
Helix-turn-helix domain protein n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NIC6_9MOLU
Helix-turn-helix family protein {ECO:0000313|EMBL:KIE44432.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Predicted transcriptional regulators
L2_040_124G1_scaffold_506_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9632..11449
DNA (1818bp) protein (606aa)
GTPase HflX n=1 Tax=Clostridium novyi (strain NT) RepID=A0PZT4_CLONN
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
GTP-binding protein
L2_040_124G1_scaffold_506_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11733..12683)
DNA (951bp) protein (317aa)
carbamate kinase (EC:2.7.2.2)
carbamate kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028918F5
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_506_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12714..14120)
DNA (1407bp) protein (469aa)
arginine:ornithine antiporter n=1 Tax=Clostridium sp. JC122 RepID=UPI000289710F
Transporter, basic amino acid/polyamine antiporter family protein {ECO:0000313|EMBL:KIE44357.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
arginine/ornithine antiporter
L2_040_124G1_scaffold_506_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14329..15327)
DNA (999bp) protein (333aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
argF3; ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288777C
L2_040_124G1_scaffold_506_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15356..16285)
DNA (930bp) protein (310aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
arcA_2; arginine deiminase (EC:3.5.3.6)
arginine deiminase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289D639
L2_040_124G1_scaffold_506_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16318..16665)
DNA (348bp) protein (116aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
arcA_2; arginine deiminase (EC:3.5.3.6)
arginine deiminase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289D639
L2_040_124G1_scaffold_506_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16925..17818)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3X6_9CLOT
CAAX protease self-immunity family protein {ECO:0000313|EMBL:KIE44710.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
CAAX amino terminal protease family
L2_040_124G1_scaffold_506_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18014..19348)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002EA31FB
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:KIE45056.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L2_040_124G1_scaffold_506_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19372..20757)
DNA (1386bp) protein (462aa)
L-cystine uptake protein tcyP n=1 Tax=Clostridium ultunense Esp RepID=M1ZBL6_9CLOT
L-cystine uptake protein tcyP {ECO:0000313|EMBL:KIE44972.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
sodium:dicarboxylate symporter
L2_040_124G1_scaffold_506_20
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(21664..23226)
DNA (1563bp) protein (521aa)
ABC transporter related n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TF88_CALOO
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ADL42858.1}; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47).;"
L2_040_124G1_scaffold_506_21
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23237..24826)
DNA (1590bp) protein (530aa)
ABC transporter related protein n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SFS8_CALK2
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:AEM74287.1}; TaxID=632516 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor lactoaceticus 6A.;"
L2_040_124G1_scaffold_506_22
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25138..25905)
DNA (768bp) protein (256aa)
Metallo cofactor biosynthesis protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LUS1_9CLOT
Metallo cofactor biosynthesis protein {ECO:0000313|EMBL:CDB91163.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
L2_040_124G1_scaffold_506_23
unknown

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comp(26137..26271)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 23 items

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