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L2_040_124G1_scaffold_533

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_533_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1089..2099)
DNA (1011bp) protein (337aa)
oligopeptide/dipeptide ABC transporter, ATPase subunit (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AGF55209.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AGF55209.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MB91_9CLOT
L2_040_124G1_scaffold_533_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2092..3087)
DNA (996bp) protein (332aa)
Oligopeptide ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CCQ98581.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCQ98581.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MFR2_9CLOT
oligopeptide transport ATP-binding protein OppD
L2_040_124G1_scaffold_533_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3097..3942)
DNA (846bp) protein (282aa)
Dipeptide transporter membrane component of ABC superfamily n=1 Tax=Clostridium ultunense Esp RepID=M1Z6X6_9CLOT
Dipeptide transporter membrane component of ABC superfamily {ECO:0000313|EMBL:CCQ98580.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
appC; oligopeptide transport system permease protein AppC
L2_040_124G1_scaffold_533_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4051..5019)
DNA (969bp) protein (323aa)
Dipeptide transporter membrane component of ABC superfamily n=1 Tax=Clostridium ultunense Esp RepID=M1ZIW7_9CLOT
Dipeptide transporter membrane component of ABC superfamily {ECO:0000313|EMBL:CCQ98579.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
appB2; oligopeptide transport system permease protein AppB
L2_040_124G1_scaffold_533_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5127..6821)
DNA (1695bp) protein (565aa)
Oligopeptide-binding protein AppA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LQQ9_9CLOT
appA2; oligopeptide-binding protein AppA
Oligopeptide-binding protein AppA {ECO:0000313|EMBL:AGF55205.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_040_124G1_scaffold_533_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7222..10593)
DNA (3372bp) protein (1124aa)
Type I restriction-modification system restriction subunit n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZL42_CLOB0
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:KIE46960.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative type I restriction-modification system, R subunit
L2_040_124G1_scaffold_533_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10731..10880)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZL41_CLOB0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIE46848.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_533_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10843..11457)
DNA (615bp) protein (205aa)
Restriction endonuclease S subunit n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K4P4_CLOPA
restriction endonuclease S subunit
Restriction endonuclease S subunit {ECO:0000313|EMBL:AGK96696.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_040_124G1_scaffold_533_9
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11508..12494)
DNA (987bp) protein (329aa)
Integrase family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0B2_9CLOT
Integrase family protein {ECO:0000313|EMBL:EET85067.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
xerC2; tyrosine recombinase XerC
L2_040_124G1_scaffold_533_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12583..13761)
DNA (1179bp) protein (393aa)
type I restriction-modification system,specificity subunit S (EC:3.1.21.3)
Type I restriction-modification system,specificity subunit S n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZL39_CLOB0
Type I restriction enzyme S subunit {ECO:0000313|EMBL:CAL82231.1}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A).;"
L2_040_124G1_scaffold_533_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13843..15300)
DNA (1458bp) protein (486aa)
Putative type I restriction-modification system, M subunit n=2 Tax=Clostridium botulinum RepID=C3L1K3_CLOB6
putative type I restriction-modification system, M subunit
Uncharacterized protein {ECO:0000313|EMBL:AJE11912.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
L2_040_124G1_scaffold_533_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15551..16303)
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1Q6D8_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIE47315.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_533_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16462..16926)
DNA (465bp) protein (155aa)
Transcription elongation factor GreA n=3 Tax=Clostridium botulinum RepID=B1IEU0_CLOBK
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_040_124G1_scaffold_533_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16993..17478)
DNA (486bp) protein (162aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium botulinum A1 str. CFSAN002368 RepID=S8CCE2_CLOBO
nitrogen regulation protein NIFR3
L2_040_124G1_scaffold_533_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17527..17952)
DNA (426bp) protein (142aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) RepID=A7GB69_CLOBL
dihydrouridine synthase family protein
L2_040_124G1_scaffold_533_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18139..18489)
DNA (351bp) protein (117aa)
NUDIX domain protein {ECO:0000313|EMBL:KIE47258.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
NUDIX hydrolase id=1726648 bin=GWB2_Clostridiales_37_7 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
NUDIX hydrolase
L2_040_124G1_scaffold_533_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18504..18620)
DNA (117bp) protein (39aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE47063.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_533_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18685..19005)
DNA (321bp) protein (107aa)
UPF0145 protein Cthe_0398 n=7 Tax=Clostridium thermocellum RepID=Y398_CLOTH
UPF0145 protein U732_1299 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_533_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19205..20296)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2MYN5_9CLOT
Putative amidase domain protein {ECO:0000313|EMBL:KIE47350.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_533_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20317..21222)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CMR3_9FIRM
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:KIE47123.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
D-alanyl-D-alanine carboxypeptidase
L2_040_124G1_scaffold_533_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21340..22065)
DNA (726bp) protein (242aa)
Membrane protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z7H4_9CLOT
Putative membrane protein {ECO:0000313|EMBL:KIE47347.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_533_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22263..22472)
DNA (210bp) protein (70aa)
FAFL125Wp n=1 Tax=Ashbya gossypii (strain FDAG1) RepID=M9N2H7_ASHG1
Putative lipoprotein {ECO:0000313|EMBL:KIE47077.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_533_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24453..24959)
DNA (507bp) protein (169aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium ultunense Esp RepID=M1ZB45_9CLOT
Displaying 23 items

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