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L2_040_124G1_scaffold_573

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_573_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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885..3287
DNA (2403bp) protein (801aa)
Stage II sporulation protein E {ECO:0000313|EMBL:KIE45725.1}; EC=3.1.3.16 {ECO:0000313|EMBL:KIE45725.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
stage II sporulation protein E n=1 Tax=Clostridium sp. JC122 RepID=UPI0002885F86
stage II sporulation protein E
L2_040_124G1_scaffold_573_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3454..4830
DNA (1377bp) protein (459aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
tRNA(Ile)-lysidine synthetase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002889A93
cell cycle protein MesJ
L2_040_124G1_scaffold_573_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4838..5377
DNA (540bp) protein (180aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KIE45709.1}; EC=2.4.2.8 {ECO:0000313|EMBL:KIE45709.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288EA06
hypoxanthine-guanine phosphoribosyltransferase
L2_040_124G1_scaffold_573_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5495..7441
DNA (1947bp) protein (649aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cell division protein FtsH n=1 Tax=Clostridium sp. JC122 RepID=UPI000287B23A
ftsH; ATP-dependent metalloprotease FtsH
L2_040_124G1_scaffold_573_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7624..8013
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N2A7_9CLOT
Thioesterase superfamily protein {ECO:0000313|EMBL:KIE45703.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_573_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8078..9748
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
formate--tetrahydrofolate ligase n=1 Tax=Clostridium tunisiense RepID=UPI0002F7A478
Formate--tetrahydrofolate ligase
L2_040_124G1_scaffold_573_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10010..11500
DNA (1491bp) protein (497aa)
propionyl-CoA carboxylase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002892FD1
Carboxyl transferase domain protein {ECO:0000313|EMBL:KIE45931.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
AccA2; acetyl-CoA carboxylase subunit alpha
L2_040_124G1_scaffold_573_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11513..11863
DNA (351bp) protein (117aa)
sodium pump decarboxylase subunit gamma n=1 Tax=Clostridium sp. JC122 RepID=UPI000289E25B
Oxaloacetate decarboxylase, gamma chain family protein {ECO:0000313|EMBL:KIE45811.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_573_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11887..12267
DNA (381bp) protein (127aa)
Glutaconyl-CoA decarboxylase subunit gamma {ECO:0000313|EMBL:KIE45733.1}; EC=4.1.1.70 {ECO:0000313|EMBL:KIE45733.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PG50_9CLOT
biotin/lipoyl attachment domain-containing protein
L2_040_124G1_scaffold_573_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12286..13422
DNA (1137bp) protein (379aa)
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:KIE45745.1}; EC=4.1.1.70 {ECO:0000313|EMBL:KIE45745.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Clostridium sp. JC122 RepID=UPI0002891A1B
sodium ion-translocating decarboxylase subunit beta
L2_040_124G1_scaffold_573_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13598..13777
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002EDD106
Uncharacterized protein {ECO:0000313|EMBL:KIE45945.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_573_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13783..13986
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE45904.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_573_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14143..14922
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274, ECO:0000256|SAAS:SAAS00088448};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
coaX; pantothenate kinase (EC:2.7.1.33)
pantothenate kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002899136
L2_040_124G1_scaffold_573_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14931..15908
DNA (978bp) protein (326aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002893F32
putative TIM-barrel protein, nifR3 family
L2_040_124G1_scaffold_573_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16188..16769
DNA (582bp) protein (194aa)
transcription elongation factor GreA n=1 Tax=Clostridium tunisiense RepID=UPI00030C32E8
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
greA; transcription elongation factor GreA
L2_040_124G1_scaffold_573_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16782..18311
DNA (1530bp) protein (510aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
lysS; lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium sp. BL8 RepID=T0PIG2_9CLOT
L2_040_124G1_scaffold_573_17
unknown

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18313..18441
DNA (129bp) protein (43aa)

This feature has no annotations

L2_040_124G1_scaffold_573_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18954..20342
DNA (1389bp) protein (463aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Glycine--tRNA ligase n=1 Tax=Clostridium sp. BL8 RepID=T0N9D1_9CLOT
glyS; glycyl-tRNA synthetase
L2_040_124G1_scaffold_573_19
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20854..22227
DNA (1374bp) protein (458aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287F7BB
L2_040_124G1_scaffold_573_20
unknown

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22555..22812
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying 20 items

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