ggKbase home page

L2_047_000M1_scaffold_1415_3

Organism: dasL2_047_000M1_concoct_38_fa

near complete RP 46 / 55 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(2498..3838)

Top 3 Functional Annotations

Value Algorithm Source
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 446.0
  • Bit_score: 890
  • Evalue 1.30e-256
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 446.0
  • Bit_score: 890
  • Evalue 6.40e-256
Ribosomal protein S12 methylthiotransferase RimO n=3 Tax=root RepID=D4JWK2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 446.0
  • Bit_score: 890
  • Evalue 4.60e-256

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Eubacterium] siraeum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1341
ATGGCAGAAACGATAAAGGTCGGAATGGTATCTCTCGGATGTCCGAAAAACCAGTGCGACGCTGAGCTTATGCTTGCAAAGATAGCGAAAGCAGGCTTCAAGATAGTAAACGAGGCAGGTCTTGCGGATGTTGTTATTATCAACACCTGCGGTTTTATACAAAGCGCAAAGGAAGAAGCCATCGAGGAGATAATGGAGGCAATAAGCCGCAAAAATGACGGTATCAACAAAAAGATAATCGTAACGGGCTGTCTTGCCGAGCGTTATCAGAAGCAGATGGACGAAGAATTCCCCGAAATAGACGCAGTGGTAGGTATTGCAAAGAACGATGATATAGTTGAAATCATAAACTCTGTAATGCTGGACAGGAGAGTCGTTACCTTCGGCGACAAGCTGTGTCACAATATGGAGGGCGACAAGCTGCAGTCTACTCTGCCCCACTATGCGTATCTGAGAATTGCGGACGGCTGTTCAAACAAATGTTCTTACTGCGCAATACCGCTTATAAGAGGTAAAATGCGTTCCAGAAAGATGGAGAACATAATAGAGGAAGCAAAGAAATTTGCCGAAAACGGCGTAAAGGAGCTTGTTATAGTAGCACAGGACGTTACGGCATACGGCATTGACTTATATAAGAAATATGCTCTGCCGGATTTGCTTAAGCAGTTATGTAAGATAGACGGCATAAAGTGGATAAGACTGCTTTACTGCTATCCCGAAAGAATGACGGACGAGCTTATCGAAACAATAAAGACAGAGGACAAGGTGCTGAATTATATTGATATTCCGATACAGCACTGCAACAAGGAAATTCTCCGCAATATGTACCGTGGCGGCGACGAGCAGAGCCTGCGTGAGCTGTTTGCAAAGCTCCGCCGTGAAATTCCCGGTGTGGTGCTGAGAACAACGCTTATCACGGGCTTCCCCGGTGAAACGGAGGAGCAGTTCAGCGAACTTGCCGAATTTGTAAACGATATAAAGTTTGAGCGTCTTGGCTGCTTTGCCTATTCTGCGGAAGAAGATACTCCCGCCGCCGAAATGCCCGACCAGGTAGACGAGGGCGAAAGACAGCGCAGAGCGGATATAATCACGAGCGAACAGGAAATACGCATGGGCGAATATTACGCAGGTATGGTAGGCAACACCTACGAGGTAGTCTGTGAGGGCTTTGACCGCTACTCCGATATGTATTTCGGCAGAAGTATGCACTTTGCTCCCGAAATTGACGGAATGATATACTTCACATCGGCAAAAGATAAAAGCTCGCTTACGATAGGCGACTTTGTAAATGTTAAGATCACCGATGTTCTGGAAAACAATCTGCTCGGCGAGCGGGTATAA
PROTEIN sequence
Length: 447
MAETIKVGMVSLGCPKNQCDAELMLAKIAKAGFKIVNEAGLADVVIINTCGFIQSAKEEAIEEIMEAISRKNDGINKKIIVTGCLAERYQKQMDEEFPEIDAVVGIAKNDDIVEIINSVMLDRRVVTFGDKLCHNMEGDKLQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKMENIIEEAKKFAENGVKELVIVAQDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRLLYCYPERMTDELIETIKTEDKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLRTTLITGFPGETEEQFSELAEFVNDIKFERLGCFAYSAEEDTPAAEMPDQVDEGERQRRADIITSEQEIRMGEYYAGMVGNTYEVVCEGFDRYSDMYFGRSMHFAPEIDGMIYFTSAKDKSSLTIGDFVNVKITDVLENNLLGERV*