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L3_058_000G1_scaffold_2568_29

Organism: dasL3_058_000G1_concoct_79_sub_fa

near complete RP 43 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 13 / 38
Location: 23676..24215

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 179.0
  • Bit_score: 126
  • Evalue 2.90e-26
2'-5' RNA ligase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYB6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 179.0
  • Bit_score: 126
  • Evalue 2.10e-26
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 180.0
  • Bit_score: 102
  • Evalue 7.00e-20

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Taxonomy

[Clostridium] leptum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGCGCCTGTTCATTGCCGTATCCCTGCCTCCTCTCTGGAAGGATCGGATGGATACGGCCACGCACTATCTGAAGACACATACCGAGCACTGCATCCCCACACCGCGGGGAACCTTTCATTTGACGCTGGCCTTCCTGGGCGAGACAGACCGCCTGACAGACGTCATTCAAGCCATGGATCAGGTCCATGGTGCGCCGTTCCCCCTGATCAGCTCTGGAATCGGACAGTTCCCGCTGAAAGAGGGGGACCTCTGGTGGATGGGAATCGAGTCCACACCGCCGCTGATGGATCTCCAGGCACAGCTGGCAGATTCGCTGCGCGGCGCCGGTTTTGAGATCAGTGATAAGCCCTATCAGCCGCACGCCAGCCTTGCGCGTCAGGTCAAGCCCAAGCCGGATCTGGATGTGGCTGAGTTGGAGCGCCTTCTTCCGCCCATGAGCTTTGAGGTGCGCTATATGACACTTTTTCGTTCGGATTGGGATCGGGGAAATCTCTTCTATACCCCGCTTCACCGCACAATGCTTACCGAAGAGAATTGA
PROTEIN sequence
Length: 180
MRLFIAVSLPPLWKDRMDTATHYLKTHTEHCIPTPRGTFHLTLAFLGETDRLTDVIQAMDQVHGAPFPLISSGIGQFPLKEGDLWWMGIESTPPLMDLQAQLADSLRGAGFEISDKPYQPHASLARQVKPKPDLDVAELERLLPPMSFEVRYMTLFRSDWDRGNLFYTPLHRTMLTEEN*