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L3_063_000G1_scaffold_52_25

Organism: dasL3_063_000G1_concoct_6_fa

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 28398..28709

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VR82_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 103.0
  • Bit_score: 199
  • Evalue 8.60e-49
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 103.0
  • Bit_score: 202
  • Evalue 1.90e-49
hfQ; HfQ protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 89.0
  • Bit_score: 145
  • Evalue 5.50e-33

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Taxonomy

Clostridium sp. NCR → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 312
ATGAAAAATACAGTATTAAACTTACAGGACTTATTCTTAAATAATGCAAGAAAAGAAAGAATACCTGTAACAATATTTTTAATGAATGGAGTTCAAGTTAAGGGGCACGTTAAGGGATTTGATAGCTACATAGTATTATTAGAAGGAGAAAACAAGCAGCAAAATCTTATATATAAGCATGCAGTATCTACTATAATACCAGGAAAACAAATAAACTTTAACAATAATAACAACCAAGGATATAACAATAACAATAACAATAACAATAATAATAATCAAGGATACAATAAAAATTATCAAGAAAACAAATAA
PROTEIN sequence
Length: 104
MKNTVLNLQDLFLNNARKERIPVTIFLMNGVQVKGHVKGFDSYIVLLEGENKQQNLIYKHAVSTIIPGKQINFNNNNNQGYNNNNNNNNNNNQGYNKNYQENK*