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L3_063_000G1_scaffold_5297

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_5297_1
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(452..1105)
DNA (654bp) protein (218aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H044_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB31088.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
putative metalloendopeptidase
L3_063_000G1_scaffold_5297_2
unknown

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1236..1895
DNA (660bp) protein (220aa)

This feature has no annotations

L3_063_000G1_scaffold_5297_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2072..2617
DNA (546bp) protein (182aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6C9_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO35892.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_063_000G1_scaffold_5297_4
unknown

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2649..3509
DNA (861bp) protein (287aa)

This feature has no annotations

L3_063_000G1_scaffold_5297_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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3522..3938
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28295.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_063_000G1_scaffold_5297_6
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4049..4456)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X3A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10649.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
Preprotein translocase subunit SecB.
L3_063_000G1_scaffold_5297_7
Acholeplasma palmae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(4468..4845)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Acholeplasma palmae (strain ATCC 49389 / J233) RepID=U4KS87_ACHPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCV64821.1}; TaxID=38986 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma palmae.;"
L3_063_000G1_scaffold_5297_8
unknown

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comp(4878..5315)
DNA (438bp) protein (146aa)

This feature has no annotations

L3_063_000G1_scaffold_5297_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5412..5723)
DNA (312bp) protein (104aa)
Regulator of competence-specific genes n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SGS0_9FIRM
TfoX N-terminal domain protein {ECO:0000313|EMBL:EDS00044.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Regulator of competence-specific genes
L3_063_000G1_scaffold_5297_10
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(5784..7277)
DNA (1494bp) protein (498aa)
Stage 0 sporulation protein YaaT n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZ30_9FIRM
Stage 0 sporulation protein YaaT {ECO:0000313|EMBL:CDB87396.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_063_000G1_scaffold_5297_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(7393..8349)
DNA (957bp) protein (319aa)
Putative DNA polymerase III delta' subunit n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNM6_9FIRM
Putative DNA polymerase III delta' subunit {ECO:0000313|EMBL:CDB87397.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
DNA polymerase III subunit gamma and tau
L3_063_000G1_scaffold_5297_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(8480..9022)
DNA (543bp) protein (181aa)
Putative stage V sporulation protein T n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GWR2_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:CDB29928.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
spoVT; transcriptional regulator spoVT
Displaying 12 items

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