ggKbase home page

L3_063_368G1_scaffold_174_14

Organism: dasL3_063_368G1_concoct_36_fa

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(14975..15370)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator DeoR family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A485_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 131.0
  • Bit_score: 233
  • Evalue 1.20e-58
Uncharacterized protein {ECO:0000313|EMBL:KGI74253.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 131.0
  • Bit_score: 236
  • Evalue 1.90e-59
lactose phosphotransferase system transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 130.0
  • Bit_score: 97
  • Evalue 2.20e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Collinsella sp. 4_8_47FAA → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 396
GTGACCAATTCGCTTTCGGCCTTTAGCCTGCTCGAGGCGCGCGAGGATTGCGAGCTGTGCCTGGTGGGCGGCATGTACCGCCGCCGCACCGCCGCCTTTGTGGGGCCCACGGCCGAGGATACCCTGCGCGCACTAGGGATTGACACGGCGTTTATCGGTGCCAACGGCATTCTGGACGGCGACGCGTCCACGTCCAACATGGACGAGGGCCGCATCCAGCAGCTCGTCTTTAGCAAGGCCGATACGCGCTGCCTCATCGCCGACTCCAGCAAGATCGGCAGGCACGGCTTCTACACTTTCTGCCGCCTGGACAGTTTGGACGCCGTGGTGTGCGAGCCGGGTATTACCGCCGAGGATCGTGTCGCCATCGAGGAGCACACGCAGGTCATCTGCTAG
PROTEIN sequence
Length: 132
VTNSLSAFSLLEAREDCELCLVGGMYRRRTAAFVGPTAEDTLRALGIDTAFIGANGILDGDASTSNMDEGRIQQLVFSKADTRCLIADSSKIGRHGFYTFCRLDSLDAVVCEPGITAEDRVAIEEHTQVIC*