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L3_068_000M1_scaffold_1853_13

Organism: dasL3_068_000M1_concoct_1_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(14820..15422)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KSH0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 200.0
  • Bit_score: 382
  • Evalue 1.40e-103
Sigma-70 region 2 {ECO:0000313|EMBL:ERJ95232.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 200.0
  • Bit_score: 382
  • Evalue 2.00e-103
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 182.0
  • Bit_score: 139
  • Evalue 7.60e-31

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 603
GTGCAGGAACGTTCTCTGATACGCAGACTCAAACAGCACCACCCGCAGGCTCTGGAGGAGTTGATTACAACTTATAGCCCCTATGTGGGAACGATCATACGCAATATTATCGGAAAGTATCTGGCAGAACCGGACGTGGAAGAACTGACGGCAGATGTGTTTCTGGCGGTGTGGGAACATACCGACCAGCTGAAAGCCGGAAAGCTGACGGCATATCTGGCGGCAATTGCCCGAAATCGGGCGAAGAACCGAATCCGCAGCTATCACGAAACCGTGAATCTGGAAGATCTGGTGGAGATTGGCAGCGAAGAAGATGTAGAAGGCAACATCGACCAGAAGATTCTGGGGGAACTGCTGCAGGACGTACTGGACACCCTCTCCGCAAAGGACAGGGAGATTCTGGTGCGGTACTACTATTGCTATGAACCCGTCCGGCAGATCGCCGGCACGCTGCACATGAGCGAATCCGCAGTGAAAATGCGAATGAGCCGTGCCAGAAAGAAGTTGCAGCAGGAACTGGTGGAACGGGGATATGCGTATGAAGACACACCGGCAGTGCAGCAGGTTCGCTTCACCGCCATGGGGAAAGGAGCTATCTCATGA
PROTEIN sequence
Length: 201
VQERSLIRRLKQHHPQALEELITTYSPYVGTIIRNIIGKYLAEPDVEELTADVFLAVWEHTDQLKAGKLTAYLAAIARNRAKNRIRSYHETVNLEDLVEIGSEEDVEGNIDQKILGELLQDVLDTLSAKDREILVRYYYCYEPVRQIAGTLHMSESAVKMRMSRARKKLQQELVERGYAYEDTPAVQQVRFTAMGKGAIS*