ggKbase home page

L3_068_000M1_scaffold_1884_4

Organism: dasL3_068_000M1_concoct_1_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(2331..2690)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQT1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 237
  • Evalue 5.60e-60
UPF0122 protein RUMCAL_02016 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 237
  • Evalue 7.90e-60
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 91.0
  • Bit_score: 97
  • Evalue 1.50e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
ATGTCCAAGGATTTGCGATTTGCCATGCTGCTGGATTGCTACGGCGAATTTCTGACACCGCATCAGTATCGGCTGACGGAACTGTACTATTGTGCAGACCTGTCCCTCAGCGAGATCGCGGAGATCGTCGGCATCACCCGTCAGGGGGTGCGGGACGGCATCAAGCGTGGCGAACAGATTTTGCAGGAAATGGAAGACAAGCTGCAGTTTGCGGCGAGGTTCAACGCTCTGCGGGAAAACTACAGTGCGATCGCCTCGACGTTACAGTCGATCCAGACACAGACGGCAGACCAGCCGCAGGTGCAGACCGCCTGCCGCGAGGCAATGGAAGCGGTACATCACGGGCTGGAGCTGCTCTGA
PROTEIN sequence
Length: 120
MSKDLRFAMLLDCYGEFLTPHQYRLTELYYCADLSLSEIAEIVGITRQGVRDGIKRGEQILQEMEDKLQFAARFNALRENYSAIASTLQSIQTQTADQPQVQTACREAMEAVHHGLELL*