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L3_068_000M1_scaffold_1884_9

Organism: dasL3_068_000M1_concoct_1_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(7361..7732)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRC1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 1.10e-50
Sigma-70 region 2 {ECO:0000313|EMBL:ERJ94615.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 1.50e-50
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 121.0
  • Bit_score: 75
  • Evalue 6.30e-12

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 372
ATGCGGACGGAACACCTCACCGGCTATCTCGCCAGCATTGCCCGTTCCAAGGGGTACAACTGGCTGCGGAAAAACCGCCCCGAAACCATGCCCATTGATGACGTGGTGATCTCCGACGATACCGATGTTTCGGCACAGGCAGAGCAGGCGGAACTGGCGGGCATTGTACAGGAAATGCTGGCACAGCTGCCGGAACAGGATCGGGAACTGCTGCTGCGGTTCTATTTCTACCGCCAGTCCGTGCGGGAAATTGCCGGCGAAATGCACATGAAAGAATCCACCGTGAAAACCAGAATGTACCGCAGCCGGAAAAAACTGCGGCAGCTGTTCACAGAAAGGGGTTATGGCTATGAGCAAATGGAACTTGTTTGA
PROTEIN sequence
Length: 124
MRTEHLTGYLASIARSKGYNWLRKNRPETMPIDDVVISDDTDVSAQAEQAELAGIVQEMLAQLPEQDRELLLRFYFYRQSVREIAGEMHMKESTVKTRMYRSRKKLRQLFTERGYGYEQMELV*