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L3_068_000M1_scaffold_10502_4

Organism: dasL3_068_000M1_maxbin2_maxbin_020_fasta_sub_fa

near complete RP 42 / 55 MC: 2 BSCG 45 / 51 MC: 8 ASCG 13 / 38
Location: comp(2472..3413)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 313.0
  • Bit_score: 611
  • Evalue 4.00e-172
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 313.0
  • Bit_score: 574
  • Evalue 1.40e-161
DNA-directed RNA polymerase subunit alpha n=2 Tax=Collinsella RepID=A4EA86_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 313.0
  • Bit_score: 611
  • Evalue 2.90e-172

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Taxonomy

Collinsella sp. CAG:166 → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGTCAGAATTCATTAGGCCTCAGGTTCAGGTCGAAGAGATCAACGAGACGTCTGCTCGTGTCTCCGTCGAGCCGCTCGAGCGTGGCTACGGCGATACGCTGGGTAACTCCCTTCGTCGCGTACTTCTGTCCTCGCTCGAGGGTGCCGCCGTCGAGGCTATTCAGATCGATGGTGCACAGCACGAGTTCATGACCATCCCTAACATGGTCGAGGATGTCACCGACATCGTCCTGAATGTCAAGGGTCTTGTCTTCAGGGCTCTCGGCACGACCGACGAGGCGACCGCCACCATCTCGGTTGACGGCCCCTGCGAGGTCACCGGTGCGGACTTCTTTATTCCGTCCGAGTTTGAGCTGGTCAACCCCGAGCAGCACATCGCTACGCTCACCGAGGGCGGCCATCTCACCATGAGCATGCGCATCGGCTATGGCCGCGGCTATGTCTCTGGCGAGGCCAACAAGCGCGACAACGATCCCATCGGTGTGATCCACGTCGACTCGCTGTACTCGCCGGTTTCCCGTTGCGCCAAGCTCGTTGAGGCTTGCCGTGTCGGTCAGCACACCGACTACGACCGCCTTGTCCTCGAGATCGAGACCAACGGCTCCATCGCCCCGCGCGACGCCGTGGTCCAGGCTGCCAATATCATCAACCAGCATATGGCCGCCTTTATGAACCTTGCCGAGACCCCCGAGGTCGAGGAGGAGGCTTCGATCTTCGCTCCCGAGGTCACCAACGACAACGCCGAGCTGGACAAGCAGATCGAGGATCTTGACCTTTCCGTCCGTTCCTACAACTGCCTTAAGCGCGCCAGCATTCACTCGGTCCGTCAGCTCGTTGAGTTCTCGGAGAACGATCTGCTCAACATCCGTAACTTCGGTGTTAAGTCGATCGAGGAAGTGAAGGACAAGCTTGAGTCCATGGGCCTGAGCCTGAAGGCTTAA
PROTEIN sequence
Length: 314
MSEFIRPQVQVEEINETSARVSVEPLERGYGDTLGNSLRRVLLSSLEGAAVEAIQIDGAQHEFMTIPNMVEDVTDIVLNVKGLVFRALGTTDEATATISVDGPCEVTGADFFIPSEFELVNPEQHIATLTEGGHLTMSMRIGYGRGYVSGEANKRDNDPIGVIHVDSLYSPVSRCAKLVEACRVGQHTDYDRLVLEIETNGSIAPRDAVVQAANIINQHMAAFMNLAETPEVEEEASIFAPEVTNDNAELDKQIEDLDLSVRSYNCLKRASIHSVRQLVEFSENDLLNIRNFGVKSIEEVKDKLESMGLSLKA*