ggKbase home page

L3_069_000G1_scaffold_576_4

Organism: dasL3_069_000G1_metabat_metabat_62_fa_fa

near complete RP 47 / 55 BSCG 50 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(5143..5703)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LTC5_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 145
  • Evalue 3.50e-32
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 145
  • Evalue 9.80e-33
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 145
  • Evalue 4.90e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] clariflavum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 561
TTGCTGAATAAAATTAGAATCGGTGAAATTGTAAGTGTTCATGGTGTCAAGGGCGCACTAAAAGTGTTGCCTTTGACCGATAATCCCATACGGTTTTGTTCTCTTACGGAAGTCGAACTTGTTCCGAAGCGGAAAGATAGCCGGGGAGCAGGGAAATATAAAGTAATGTCTGCAACGCCATCGGGAAATATCGTCCTTCTGAAACTTTATGGGATCGAAGATCGCGATAAGGCAGAGACGCTTCGCGGGATGTTTTTGGAAATTCCACGGGAAAAAGCGGTCAAACTGCCGAAAGATACTTATTTTATCGGTGATCTGATCGGGTGCGTAGTGAAAGAGGAAAACGGTAATTTCCTTGGTACTCTTACGGATGTACAGTCTACGGGAGCAAATGACATTTACGAAATTACGGGGGAAGACAGAAAAAAAATATGGATTCCGGCGATTGCGGACGTAATCAAAGCGGTCAATGTGGAAAAAAGCGAAATAACGGTTTCTCTTCTGCCGGGACTGAAAGAAGTATACGAAGATAACGGCGAAGAGGAAAGCGGCGAAGAATAA
PROTEIN sequence
Length: 187
LLNKIRIGEIVSVHGVKGALKVLPLTDNPIRFCSLTEVELVPKRKDSRGAGKYKVMSATPSGNIVLLKLYGIEDRDKAETLRGMFLEIPREKAVKLPKDTYFIGDLIGCVVKEENGNFLGTLTDVQSTGANDIYEITGEDRKKIWIPAIADVIKAVNVEKSEITVSLLPGLKEVYEDNGEEESGEE*