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L3_072_000M1_scaffold_1295_16

Organism: dasL3_072_000M1_concoct_42_fa

near complete RP 45 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 17579..19009

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 476.0
  • Bit_score: 917
  • Evalue 6.80e-264
rho; transcription termination factor Rho (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 462.0
  • Bit_score: 508
  • Evalue 1.90e-141
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYC9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 476.0
  • Bit_score: 917
  • Evalue 4.90e-264

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Taxonomy

Clostridium sp. CAG:349 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1431
ATGGATTTTTCACGCGAACAGTTGCAGGACAAAAACCTGTTTGAATTGCGCGAAATCGCGCGCGAAAACAGGGTGCAGTCCCCGACAAAATTAAACAAGGAAGAACTTATTTCACAAATTGTCGAAGCGTCTTCTCAAAGGGTAAAAGGGCTTAAAATCCGCCCGGTTTCACGCCCGTCGAAACTTGTCGACGCCCCGAGAAGGAACGCGCAGAACGACGTCCCCGAAAAAGCCGCGGAATCGATAAACGAGATTATGGCTGTCGATGAAACCTGCGAAGAAAGGGAAGGTATCCTGGAAATTCATCCCGACGGCTATGGCTTTATCCGCGTCAGAAACTGCGAACACAGCGAAAAGGACGTTTACGTTTCCGCAATCAAAATCAGGAAAGCGGGACTTCGTCAGGGGGATATGATCAAGGGCATCGTGAAGGTCGCTTACGACAATAAGCCCGCCGCGCTTTTAATCATCAATACCGTCAACGGCGTGCCCGCGGAAGAACTCAGAAAACGCCCGCACTTTGACGACCTTGTCCCCATTTATCCCGACGAGCGTCTGAAACTTGAAAACGCGCGCAGCAAAAACGACTTCGCAATCCGCGAAATCGACCTTATCGCGCCAATCGGGAAAGGTCAGCGCGGTATGATCGTGTCGCCCCCGAAAGCGGGCAAAACGACTCTGCTTAAAAAAATCGCGAACAGCATTTCGGAAAATTATCCCGACGTAACCCTTATGGTATTGCTCATCGACGAGCGTCCCGAAGAAGTTACCGATATGCAAAGAAGTATCAAAGGCGAGGTCGTTTACAGCACTTTCGACGAAATGCCGGAACACCATACGAAAGCGGCGGAACTGTTGCTTTCCCGCGCGAAACGACTTGTCGAAAACGGCAAAGACGTCGTGATTCTGATGGACAGCTTAACCCGCCTTGCGCGCGCATATAACCTTACGATTCCCCCGACGGGCAGGACGCTTTCCGGCGGTATCGATCCCGGCGCGTTGCATAGCCCGAAATCGTTTTTCGGAAGCGCGAGAAATATCGAAAACGGCGGAAGCCTTACCATTATCGCAACCGCTCTCGTCGACACCGGAAGCCGTATGGACGACGTCATTTACGAGGAGTTCAAGGGCACGGGCAATATGGAAATCCACCTTGACAGAAAACTGTCCGAAAAGAGGATTTTCCCCGCAATCGATTTAAACCGCAGCGGCACGAGAAGAGAAGACTTGTTGTTGTCGCAGGACGAGCTGGAAGGCGTGTGGACAATGCGTAAAATTTTGTCGTCGGGCGATACAGAATCGGCGGCTGAAAATCTGTTGCAAATGCTTGTCAAAACTTCGTCCAACGCGGAGTTTATCGAGCAACTTAAACTGCAAATGCGCCTTATCGACAAGGAAGGATATACTTTCCGCGGAACCGGCTTAAAATAA
PROTEIN sequence
Length: 477
MDFSREQLQDKNLFELREIARENRVQSPTKLNKEELISQIVEASSQRVKGLKIRPVSRPSKLVDAPRRNAQNDVPEKAAESINEIMAVDETCEEREGILEIHPDGYGFIRVRNCEHSEKDVYVSAIKIRKAGLRQGDMIKGIVKVAYDNKPAALLIINTVNGVPAEELRKRPHFDDLVPIYPDERLKLENARSKNDFAIREIDLIAPIGKGQRGMIVSPPKAGKTTLLKKIANSISENYPDVTLMVLLIDERPEEVTDMQRSIKGEVVYSTFDEMPEHHTKAAELLLSRAKRLVENGKDVVILMDSLTRLARAYNLTIPPTGRTLSGGIDPGALHSPKSFFGSARNIENGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMEIHLDRKLSEKRIFPAIDLNRSGTRREDLLLSQDELEGVWTMRKILSSGDTESAAENLLQMLVKTSSNAEFIEQLKLQMRLIDKEGYTFRGTGLK*