name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_079_062G2_scaffold_244_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(134..1408)
----------------- DNA (1275bp) protein (425aa) |
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=4 Tax=Clostridiales RepID=A7AZ54_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66199.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
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L3_079_062G2_scaffold_244_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1405..2178)
----------------- DNA (774bp) protein (258aa) |
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z181_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB92183.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
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L3_079_062G2_scaffold_244_3
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2191..2922)
----------------- DNA (732bp) protein (244aa) |
Probable transcriptional regulatory protein RUMTOR_02688 n=4 Tax=Lachnospiraceae RepID=A5KQZ6_9FIRM
Probable transcriptional regulatory protein HMPREF1025_00097 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
conserved hypothetical protein TIGR01033
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L3_079_062G2_scaffold_244_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3032..3376)
----------------- DNA (345bp) protein (115aa) |
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
mRNA interferase n=5 Tax=Clostridiales RepID=A5KQZ5_9FIRM
transcriptional modulator of MazE/toxin MazF
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L3_079_062G2_scaffold_244_5
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3499..4647)
----------------- DNA (1149bp) protein (383aa) |
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Lachnospiraceae bacterium 8_1_57FAA RepID=E5XE07_9FIRM
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L3_079_062G2_scaffold_244_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4651..6153)
----------------- DNA (1503bp) protein (501aa) |
YjeF domain protein n=2 Tax=Ruminococcus lactaris RepID=B5CRI4_9FIRM
YjeF domain protein {ECO:0000313|EMBL:EDY31922.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
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L3_079_062G2_scaffold_244_7
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6255..6935)
----------------- DNA (681bp) protein (227aa) |
Redox-sensing transcriptional repressor Rex n=4 Tax=Clostridiales RepID=A5KQZ0_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
CoA-binding protein
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L3_079_062G2_scaffold_244_8
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7169..9139
----------------- DNA (1971bp) protein (657aa) |
ABC transporter, ATP-binding protein n=4 Tax=Lachnospiraceae RepID=A5KKD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79650.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
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L3_079_062G2_scaffold_244_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(9402..12041)
----------------- DNA (2640bp) protein (880aa) |
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine-tRNA ligase n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C521_9FIRM
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L3_079_062G2_scaffold_244_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12398..12775
----------------- DNA (378bp) protein (126aa) |
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YX43_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93531.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
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L3_079_062G2_scaffold_244_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12765..13361
----------------- DNA (597bp) protein (199aa) |
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXM8_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93716.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
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L3_079_062G2_scaffold_244_12
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13498..13722
----------------- DNA (225bp) protein (75aa) |
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C9T9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE13551.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Predicted transcriptional regulator
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L3_079_062G2_scaffold_244_13
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13736..14494
----------------- DNA (759bp) protein (253aa) |
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WS19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14109.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
CAAX amino protease
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L3_079_062G2_scaffold_244_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14591..15226)
----------------- DNA (636bp) protein (212aa) |
Helix-turn-helix n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6M4_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL00487.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
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L3_079_062G2_scaffold_244_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
15391..16299
----------------- DNA (909bp) protein (303aa) |
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6N3_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL00496.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
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L3_079_062G2_scaffold_244_16
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16437..16745
----------------- DNA (309bp) protein (103aa) |
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EJ71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97369.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
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L3_079_062G2_scaffold_244_17
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(17277..17855)
----------------- DNA (579bp) protein (193aa) |
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XDC6_9FIRM
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L3_079_062G2_scaffold_244_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(17898..20057)
----------------- DNA (2160bp) protein (720aa) |
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=Lachnospiraceae RepID=A5KJF9_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EFV20702.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
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L3_079_062G2_scaffold_244_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(20386..21801)
----------------- DNA (1416bp) protein (472aa) |
Amino acid carrier protein n=5 Tax=Clostridiales RepID=A5KJF7_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EDK25460.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
amino acid carrier protein
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L3_079_062G2_scaffold_244_20
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22875..24059)
----------------- DNA (1185bp) protein (395aa) |
Chaperone protein DnaJ n=2 Tax=Lachnospiraceae RepID=F7JJJ2_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
chaperone protein DnaJ
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L3_079_062G2_scaffold_244_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(24210..26093)
----------------- DNA (1884bp) protein (628aa) |
Chaperone protein DnaK n=5 Tax=Clostridiales RepID=A5KJW2_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
chaperone protein DnaK
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L3_079_062G2_scaffold_244_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(26250..26942)
----------------- DNA (693bp) protein (231aa) |
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=V8C489_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
heat shock protein GrpE
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L3_079_062G2_scaffold_244_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(26970..28019)
----------------- DNA (1050bp) protein (350aa) |
Heat-inducible transcription repressor HrcA n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C561_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
heat-inducible transcription repressor HrcA
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L3_079_062G2_scaffold_244_24
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria
|
Not on your lists |
comp(28215..32987)
----------------- DNA (4773bp) protein (1591aa) |
Uncharacterized protein n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2K4Z5_TRELE
Uncharacterized protein {ECO:0000313|EMBL:ERJ93546.1}; TaxID=1321815 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
LPXTG-motif cell wall anchor domain-containing protein
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L3_079_062G2_scaffold_244_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(33135..34382)
----------------- DNA (1248bp) protein (416aa) |
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=5 Tax=Clostridiales RepID=E5XDJ0_9FIRM
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EFV20537.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
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L3_079_062G2_scaffold_244_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(34375..36189)
----------------- DNA (1815bp) protein (605aa) |
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Elongation factor 4 n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C3D9_9FIRM
GTP-binding protein LepA
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L3_079_062G2_scaffold_244_27
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(36211..37194)
----------------- DNA (984bp) protein (328aa) |
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3ARG4_9FIRM
DNA polymerase III {ECO:0000313|EMBL:EGG89173.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
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L3_079_062G2_scaffold_244_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(37199..38833)
----------------- DNA (1635bp) protein (545aa) |
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=A5KJX0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDK25623.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
ATPase components of ABC transporters with duplicated ATPase domains
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L3_079_062G2_scaffold_244_29
unknown
|
Not on your lists |
38968..39132
----------------- DNA (165bp) protein (55aa) |
This feature has no annotations |
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L3_079_062G2_scaffold_244_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
39086..39568
----------------- DNA (483bp) protein (161aa) |
Sporulation initiation factor Spo0A C terminal n=1 Tax=Ruminococcus torques L2-14 RepID=D4LZB9_9FIRM
Sporulation initiation factor Spo0A C terminal.
Sporulation initiation factor Spo0A C terminal {ECO:0000313|EMBL:CBL27129.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
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