ggKbase home page

L3_079_363G1_scaffold_1405_6

Organism: dasL3_079_363G1_metabat_metabat_36_fa_sub_fa

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: comp(3776..4516)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Roseburia RepID=R5HKA0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 484
  • Evalue 5.50e-134
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 484
  • Evalue 7.70e-134
sporulation sigma factor SigE similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 246.0
  • Bit_score: 384
  • Evalue 1.30e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia inulinivorans CAG:15 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
ATGATCATGAGACTTGTACTGCCAAGATATGAAAAGGTTCATTTTCTGTCCGGGATTTGCAGCCTTTTTTTGCGAAAGGAAGATGAGGTGCACTATATTGGAGGTGCAGAGATTTTGCCGCCACCGTTGGAGGGAGAGCGGGAAGCATACTGTATCCGGATGCTCGATGGTGTGCATGCAGAGCGGGCGAGAAAGGAGCTGATCGAACACAACCTGCGGCTGGTTGTATACATAGCAAAAAAGTTTGATAACACAGGGGTCGGAGTGGAGGATCTTATCTCCATAGGAACGATCGGTCTCATCAAAGGGATCAATACCTTTAATCCGGACAAAAATATTAAATTGGCCACTTACGCATCGCGCTGCATTGAAAATGAGATTTTAATGTATCTGAGGAGAAACAGCAAGACAAAACTGGAGGTGTCCATCGATGAACCGTTAAATGTGGACTGGGATGGAAATGAACTGCTCTTATCGGATATTCTGGGGACGGATGAGGATGTCGTGGGGAAAGACATGGAAACGGATGTAGAGCGGAAACTGTTAAAGACTGCGATCGAAAAGCTGTCTGGAAGGGAACGGATGATCATCGAACTGAGGTTCGGACTGAATACTTCTGACGGGGAGGAGAAGACCCAGAAGGAAGTGGCAGATATGCTTGGAATCTCCCAGTCCTATATCTCAAGACTTGAGAAAAAAATTATGGGAAGATTGAAAAAAGAAATTGTACGATTTGAATAA
PROTEIN sequence
Length: 247
MIMRLVLPRYEKVHFLSGICSLFLRKEDEVHYIGGAEILPPPLEGEREAYCIRMLDGVHAERARKELIEHNLRLVVYIAKKFDNTGVGVEDLISIGTIGLIKGINTFNPDKNIKLATYASRCIENEILMYLRRNSKTKLEVSIDEPLNVDWDGNELLLSDILGTDEDVVGKDMETDVERKLLKTAIEKLSGRERMIIELRFGLNTSDGEEKTQKEVADMLGISQSYISRLEKKIMGRLKKEIVRFE*