ggKbase home page

L3_079_363G1_scaffold_1747_9

Organism: dasL3_079_363G1_metabat_metabat_36_fa_sub_fa

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: comp(7260..8030)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Roseburia RepID=C0FQH5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 256.0
  • Bit_score: 498
  • Evalue 3.80e-138
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 256.0
  • Bit_score: 498
  • Evalue 5.30e-138
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 254.0
  • Bit_score: 428
  • Evalue 8.00e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia inulinivorans CAG:15 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
ATGAAAACGGTAGATAGAGAGAAACTCTGGGAAGAATATCAGAAAAAAAAGACACCGGAGTTAAGAGAAAAACTAATAATAGAATATTCACCGCTTGTCAAGCTTGTTGCCGGAAGATTGAGCATGTATCTCGGATATAATGTGGAATATGATGATCTTGTAAGTTATGGCATCTTTGGTTTGATCGATGCAATCGATAAATTTGATCTCGGAAAAGAAGTTAAGTTTGAAACATACGCGAGTCTGCGGATCCGTGGAACGATATTAGATCAGATTCGCAAAATGGACTGGATTCCAAGAACCGTCAGACAGAAACAGAAAAAAATCGATGAGGCGATCAAACAGGTTGAAATGCGTACCGGAAAAAATGCTTCAGATGAGGAAATCGCGCAGGAATTAGGACTCTCAGAAGACGAACTTACCACATGGCAGTCGCAGCTTAAAGTCACGAATATCGTCTCCTTAAACGAGTATCTTGAGCAGGGCGCGGAACCGGTGATGGATGCGCGGAGAAATTCCCATTTTATCCAGCCGGAAGATAAGATTGAAGAAGAAGAACTGAAACAGAAACTGGAAGAATCCTTAGAGGTTCTGACAGAGAAGGAACGTAAAGTGATTCTTTTATATTATTATGAAGATTTGACACTAAAGGAAATCAGCAGCATTCTTGAAGTATCGGAATCGAGAATTTCCCAGCTTCATACGAAGGCTCTTTTGAAAATGCGCAAAAAGCTTGGAAATTATCTTGGAATTCTCATAGACAGAGAGTAG
PROTEIN sequence
Length: 257
MKTVDREKLWEEYQKKKTPELREKLIIEYSPLVKLVAGRLSMYLGYNVEYDDLVSYGIFGLIDAIDKFDLGKEVKFETYASLRIRGTILDQIRKMDWIPRTVRQKQKKIDEAIKQVEMRTGKNASDEEIAQELGLSEDELTTWQSQLKVTNIVSLNEYLEQGAEPVMDARRNSHFIQPEDKIEEEELKQKLEESLEVLTEKERKVILLYYYEDLTLKEISSILEVSESRISQLHTKALLKMRKKLGNYLGILIDRE*