ggKbase home page

L3_083_000G1_scaffold_1924_12

Organism: dasL3_083_000G1_concoct_57_fa

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: 10000..10725

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EU84_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 234.0
  • Bit_score: 323
  • Evalue 1.60e-85
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 234.0
  • Bit_score: 323
  • Evalue 2.20e-85
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 237.0
  • Bit_score: 297
  • Evalue 2.00e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridiales bacterium 1_7_47FAA → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 726
ATGTGCATGGATGAGACAATGGATCTGATCCGGCGCGCGCATGCCGGGGATGAGGAAGCGAGGGAGCAGCTGGTCATGGGGAATGTGGGGCTGGTCTGGAGCGTGGCCCGGCATTACAGCGGCCGGGGTCATGAGCTGGAGGATCTGTTTCAGATCGGGTGTATTGGACTGTTAAAGGCTGTAGACAAGTTTGATCTTGGATTTCAGGTGCGTTTTTCCACCTATGCGGTGCCAATGATTGCGGGGGAAATCCGGCGCTTTCTGCGGGATGACGGAATGATCCGGGTAAGCCGGTCCATGAAGGAACTGGGACTTCGCGTCCGCAGGGCGCGGGAAACCCTGACGGCAAAGTCCGGGCGGGAACCGGGACTTTCGGAGATTGCGAAGGAACTGGATATCAGCTGTGAGGAAGTGGCGGCCTGCATGGGAGCCGGAGCAGAGGTGGAATCCCTGTACCGGGAGACCGGAAACGGCGAGGAGGGCGGCCTGCGTCTCATGGACCGGATCCCGGACGGAACGCAGAACGAAGAACAGCTCATGAACCGCCTGGTATTAAAACAATTGATAGAAAAACTGCCGGAGAAGGACCGGGAAATTATCGTAAGACGTTATTTTGAAAACCAGACTCAGACCAGGATTGCTGAGGATCTGAATATATCCCAGGTGCAGGTGTCGCGGCTGGAAAAACGGATTCTGAAGCAGATGCGGGAATATCTGGGGGCATAA
PROTEIN sequence
Length: 242
MCMDETMDLIRRAHAGDEEAREQLVMGNVGLVWSVARHYSGRGHELEDLFQIGCIGLLKAVDKFDLGFQVRFSTYAVPMIAGEIRRFLRDDGMIRVSRSMKELGLRVRRARETLTAKSGREPGLSEIAKELDISCEEVAACMGAGAEVESLYRETGNGEEGGLRLMDRIPDGTQNEEQLMNRLVLKQLIEKLPEKDREIIVRRYFENQTQTRIAEDLNISQVQVSRLEKRILKQMREYLGA*