ggKbase home page

L3_105_000M1_scaffold_750_25

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: comp(30433..30801)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MCN7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 122.0
  • Bit_score: 210
  • Evalue 5.80e-52
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 122.0
  • Bit_score: 210
  • Evalue 8.10e-52
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 122.0
  • Bit_score: 201
  • Evalue 7.60e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 369
ATGGCAAGAATAGCCGGTGTGGATTTGCCCAATAACAAGAGAGTGGAATACGCTCTTACTTATATCTACGGAATAGGCGTAAGTAAGTCCAACGAAATACTTGCGGCGACAGGTATAAATCCGGACACGAGAGCGAAAGATCTTAACGACGAGGAAGTCGCTAAGCTTCGTGAATATATAGATAAAAACCTTACCGTTGAGGGAGATCTCAGAAGAGACGTCGCTCTTAACATTAAAAGACTTGTCGAGATCGGATGTTACAGGGGAGTTCGTCATAGAAAGGGCCTGCCGGTGAGAGGGCAGAGAACCAAGACGAACGCGAGAACCCGCAAGGGTCCGACGAAGACCGTCGCGAATAAGAAGAAATAA
PROTEIN sequence
Length: 123
MARIAGVDLPNNKRVEYALTYIYGIGVSKSNEILAATGINPDTRAKDLNDEEVAKLREYIDKNLTVEGDLRRDVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPTKTVANKKK*