ggKbase home page

L3_105_000M1_scaffold_1803_4

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: 9288..10058

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RRF4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 256.0
  • Bit_score: 370
  • Evalue 9.10e-100
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 256.0
  • Bit_score: 370
  • Evalue 1.30e-99
RNA polymerase sigma 28 subunit SigG similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 256.0
  • Bit_score: 365
  • Evalue 8.30e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobrachium celere → Thermobrachium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
ATGACAAACAGAGTCGAAATTTGCGGAGTAAACACCTCTGAGCTCAAAGTTCTCACCGGAGCGGAAAAAGAAGATTTATTAAAAAAAATAAAAGACGGAGATATGAAAGCGAGAGACGAGTTTATACAAGGGAATCTAAAACTTGTTTTAAGCGTTATTAAAAGATTCTCGAATCGCGGCGAAAATCCCGACGACCTTTTTCAAATAGGATGTATAGGCCTTATAAAAGCGATTGACAACTTTGACATTTCACAAAACGTAAAATTCTCGACCTACGCGGTACCGATGATTATCGGAGAAATACGAAGATATTTAAGAGACAACAATTCGGTCAGGGTAAGTCGTTCGATGAGAGACACGGCGTACAGAGCGCTTTTCGTTAAAGAAAAACTGCAAAAAGAGAACCAAAAAGAACCGACTGTCGAAGAAATCGCCAAGGAACTTGATTTACCGAGAAAAGACGTAGTCATCGCTATGGAAGCGATAGTAGACCCTGTTTCTTTATTTGACCCGGTATATAACGACGATAACGATTCTCTTTATATAATGGATCAAATACACGACAAAACCAGCTCCGACACTAGCTGGATAGAGGAAATTTCTATAAAACAAGCGATCGACGCTCTTTCCGACAGGGAAAAAAATATACTTTCCCTGAGATTTTACCGGGGGAAGACGCAAATGGAAGTCGCGAAAGAAATAGGAATTTCCCAAGCGCAAGTGTCCAGACTTGAAAAAAACGCGTTAACGCAAATCAAAAACTATTTATAA
PROTEIN sequence
Length: 257
MTNRVEICGVNTSELKVLTGAEKEDLLKKIKDGDMKARDEFIQGNLKLVLSVIKRFSNRGENPDDLFQIGCIGLIKAIDNFDISQNVKFSTYAVPMIIGEIRRYLRDNNSVRVSRSMRDTAYRALFVKEKLQKENQKEPTVEEIAKELDLPRKDVVIAMEAIVDPVSLFDPVYNDDNDSLYIMDQIHDKTSSDTSWIEEISIKQAIDALSDREKNILSLRFYRGKTQMEVAKEIGISQAQVSRLEKNALTQIKNYL*