ggKbase home page

L3_105_000M1_scaffold_4422_2

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: comp(163..498)

Top 3 Functional Annotations

Value Algorithm Source
Nucleoid-associated protein HMPREF1032_01220 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY69_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 114.0
  • Bit_score: 137
  • Evalue 7.40e-30
Nucleoid-associated protein HMPREF1032_01220 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 114.0
  • Bit_score: 137
  • Evalue 1.00e-29
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 114.0
  • Bit_score: 125
  • Evalue 8.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum sp. 4_3_54A2FAA → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 336
ATGAAAGTAAGAATTCCGCAGCAACCAAGTCAGAAAGAAATGATGGAAAAATTGCAGAAACTTCAAAGCGATATGCAGTCAAAACAAGAGGAGCTTGATTCGAAGGAATACGAGGTTTCTTCCGGAGGAGGAATGGTTAAAGTTACTATTTCAGGTACAAGAGAAATAAAATCCGTTAAGATAGATCCTTCCGTTGTCGATCCTGAGGATGTGGAAATGCTTGAAGACATGATATCGGCGGCGGTGAACGAGGCGATTAAAATCGTCGATAAAACAAACGAGGAAGAAATGGGGGCTCTCACGGGAGGTCTTAATCTTCCGGGTCTCGGGTTTTAG
PROTEIN sequence
Length: 112
MKVRIPQQPSQKEMMEKLQKLQSDMQSKQEELDSKEYEVSSGGGMVKVTISGTREIKSVKIDPSVVDPEDVEMLEDMISAAVNEAIKIVDKTNEEEMGALTGGLNLPGLGF*