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L3_105_000M1_scaffold_178_19

Organism: dasL3_105_000M1_metabat_metabat_15_fa_fa

near complete RP 45 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 16379..17086

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 233.0
  • Bit_score: 278
  • Evalue 8.00e-72
ytzG; putative RNA pseudouridine synthase YtzG (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 238.0
  • Bit_score: 262
  • Evalue 7.00e-68
Pseudouridine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB54_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 233.0
  • Bit_score: 278
  • Evalue 5.70e-72

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 708
TTGCGTTTGGATAAATTTTTTGCATCTCAGTCTTTAGCATCCCGAAAAGAAGTAAAAGAACTGGTAAAAAAGGGGCTTGTTAAAATCAACGGTATCCCTGCCCGATCTTCTGATATGACAATCACACCGGAAGAAGATGTTATCCTGCTAAACGGCAAAGCAATCTCCTATAAAGAACATATTTATATCATGATGAATAAGCCGCAGGGAGTTGTGTCGGCAACCGAAGACAATCTTCATGCCACTGTTCTGGATTTGGTTCCTCCCGAACTTTTTCGCAAAGGACTGTTTCCCGCCGGCAGACTGGATAAAGACACAGTAGGTTTTGTATTAGTCACCGATGACGGAGATTTTGCACATCGCATGCTTTCCCCTAAAAAACATGTGTCCAAAACCTATGAAGCAATCATCAGCGATGCTGTTTCTCCGGAGGATATCTCCGCTTTTCAAGAGGGTTTGCAGCTAAAAGACGGAACACTTTGTCTGCGTGCCGAACTGAAAGTTCTGGAACCCGGGAAGCAGCCTCTGGTCCAAATCGTCATTCATGAAGGCAAATATCATCAGATAAAAAGGATGTTTGAAGCAAGGGGAAAAAAGGTCCTGTTTTTAAAGCGAACCAAGATCGGAAATCTATCTTTAGACGAAAATCTTGCCCCCGGTGAGTGCAAGGAAATATTGCACAAAGAACTGGATCAAATTTTGGAATAA
PROTEIN sequence
Length: 236
LRLDKFFASQSLASRKEVKELVKKGLVKINGIPARSSDMTITPEEDVILLNGKAISYKEHIYIMMNKPQGVVSATEDNLHATVLDLVPPELFRKGLFPAGRLDKDTVGFVLVTDDGDFAHRMLSPKKHVSKTYEAIISDAVSPEDISAFQEGLQLKDGTLCLRAELKVLEPGKQPLVQIVIHEGKYHQIKRMFEARGKKVLFLKRTKIGNLSLDENLAPGECKEILHKELDQILE*