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L3_105_000M1_scaffold_2384

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2384_1
unknown

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121..234
DNA (114bp) protein (38aa)

This feature has no annotations

L3_105_000M1_scaffold_2384_2
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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380..985
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ELM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03336.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
TetR family transcriptional regulator
L3_105_000M1_scaffold_2384_3
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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982..1443
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PYA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ21228.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_105_000M1_scaffold_2384_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1554..2162
DNA (609bp) protein (203aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium sp. CAG:43 RepID=R7AGK9_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDD54674.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
transcriptional regulator, TetR family
L3_105_000M1_scaffold_2384_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2541..2825
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44088.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_105_000M1_scaffold_2384_6
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2844..3059
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7ALW4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD54411.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
L3_105_000M1_scaffold_2384_7
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3075..3443
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LAP1_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16686.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_105_000M1_scaffold_2384_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3464..3931
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=root RepID=C6JGB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX71287.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_105_000M1_scaffold_2384_9
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4075..4731
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ER98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04986.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_105_000M1_scaffold_2384_10
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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4728..5372
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44254.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Acetyltransferase (isoleucine patch superfamily)
L3_105_000M1_scaffold_2384_11
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5369..6004
DNA (636bp) protein (212aa)
Chloramphenicol O-acetyltransferase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LAN7_RUMC1
Chloramphenicol O-acetyltransferase
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:CBL16682.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_105_000M1_scaffold_2384_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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6116..6829
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46574.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_105_000M1_scaffold_2384_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(6951..8150)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46575.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_105_000M1_scaffold_2384_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(8155..8967)
DNA (813bp) protein (271aa)
AAA family ATPase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIP8_9FIRM
AAA family ATPase {ECO:0000313|EMBL:CCZ46576.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
ATPase
L3_105_000M1_scaffold_2384_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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9136..9798
DNA (663bp) protein (221aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNR6_9FIRM
L3_105_000M1_scaffold_2384_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(9884..11419)
DNA (1536bp) protein (512aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0L8_9FIRM
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCZ46578.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative ABC transporter substrate-binding protein
L3_105_000M1_scaffold_2384_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11416..12234)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GUU9_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_105_000M1_scaffold_2384_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(12311..12727)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46568.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_2384_19
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(12764..13108)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46569.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_2384_20
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(13628..16360)
DNA (2733bp) protein (911aa)
Protein translocase subunit SecA n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZD0_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
secA; preprotein translocase SecA subunit
L3_105_000M1_scaffold_2384_21
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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16599..18191
DNA (1593bp) protein (531aa)
Ribonuclease n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIP3_9FIRM
Ribonuclease {ECO:0000313|EMBL:CCZ46571.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
ribonuclease
L3_105_000M1_scaffold_2384_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18242..19654
DNA (1413bp) protein (471aa)
putative RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMT0_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDB27227.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Displaying 22 items

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