ggKbase home page
Advanced Search
Search Help

L3_106_000M1_scaffold_3386_12

Organism: dasL3_106_000M1_concoct_32_fa

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 4 ASCG 12 / 38
Location: comp(8594..12991)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 1416.0
  • Bit_score: 1560
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' id=2823335 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 1435.0
  • Bit_score: 1918
  • Evalue 0.0
Tax=GWF2_Lentisphaerae_44_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 1434.0
  • Bit_score: 2218
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Lentisphaerae_44_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 4398
TTGATTGACAATACTTATGCTTACCGGGAGCTGCTGGGCAAGAGCTCGGCGTCTTCATTCGGTGCGGTTTCGATCAACGTTGCGTCGCCGGAAGTGATCCGTTCGTGGTCGTTCGGCGAGGTCAAGAACCCCGAGACCATCAACTACCGCAGTTTCAAGCCGGAAAAGGGCGGTCTCTTCTGCGAACGCATTTTCGGACCCACCCGCGACTGGGAGTGCAACTGCGGCAAATACAAGCGTGTGAAACACAAGGGGATCGTCTGCGACCGCTGCGGCGTGGAAGTGACCCAGGCCAAGGTGCGCCGCGAGCGCATGGGCCATATCGAGCTGGCCGTGCCGGTTTCGCACATCTGGTTCTTCAAGTGTATGCCGAGCCGCATCGGTCTGGTGCTCGACATGACCGCGAAGTCGCTCGAGCACGTGATCTACTATGAAGAGTACGTCGTGACCGATCCGGGCGATACGCCGCTCAAGGTCGGCCAGACCATGAACGAGATCGAATACCGCCAGGCGGTGGACGATTACGGCGACGCTTTCATGGCCGACATGGGCGCCCCGGCGATCAAGACGCTGCTGGAGCGCGTCGACCTGCCGATGCTGAAGGCCGAACTCGAGGTCAGCCTCGAGGGAACCCGCAACAAGGCGATTCGCAAGAAGCTGGCCAAGCGGCTGCGTCTCGTGGAAGGATTCATGAGCAGCAATTCGCGTCCGGAGTGGATGATTCTGACCGTTCTGCCGGTCATTCCGCCGGATCTGCGTCCGCTGGTTCCGCTCGAAGGCGGCCGGTTTGCGACGAGCGACCTGAACGACCTCTATCGTCGCGTCATCAACCGCAACAACCGCCTGAAGAATCTGCTTCAGCTGCGCACGCCGGAGGTCATCATCCGGAACGAGAAGCGCATGCTGCAGGAGGCGGTCGATTCGCTGATGGACAACGGCCGCCACGGCCGCGCGGTCACCGGCGCCGGCAACCGCGCCCTCAAGAGTCTTTCGGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGCCGTTCGGTCATCGTCGTCGGTCCCGAGCTGAAGATTCATCAGTGCGGTCTGCCGAAGAAGATGGCGATGATTCTGTTCGAGCCGTTCATCATCCGCCACCTGAAGGGGCGCGGCTTCGCGCACACCGTCCGCGGCGCCAAGAAGATGATCGAGCGCGGCGAACCGGAGGTGTGGGACATCCTCGAAGAGGTGACTCTCGGCCACCCGGTCATGCTGAACCGCGCGCCGACGCTGCACCGTCTGTCGATTCAGGCGTTCGATCCGGTCCTGATCGAAGGATCGGCGATCCGTCTGCATCCGCTGGTCTGCACCGCATACAACGCGGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCGAACGAGGCGCAGATGGAGACGAAGCTTCTGATGCTTGCGCCGAACAACATCTTCTCGCCCGCGAACGGCAAGCCGATCGTCTCTCCGACGCAGGACATCACGCTCGGCAGCTACTACCTGACCTGCGAGCCGCGCAACAAGGAGAAAGCGAAGCTTTATCGCGACTTCTTCGAGGTGCTGTACGCGATGCAGTGCGGCTTCATCAAGATTCATGACGCGGTGCGCATCCCGAACCCGGACTACGGCAAGGATACGATCTACGGCGACAAGGAGAGCAAATTCCTCCTGACCACGCCGGGCCGCTGCCTGTTCCATGAAATCTGGGATACGCGTCTCGGGTTCTTCAACCAGATTGCCAAGAAGAAGGACCTCGGCCGCCTGATCAGCGATTCGTACAACATCGCCGGGCATGAGGCGACCATCAAGCTGCTGGATGATCTGAAGGACCTCGGCTACCGCCATGCGACGCTGGCCGGCCTCTCGATCTCGATTGCGGACTTGCAGGTTCCGGACAAGAAAGAGGAGATCATCGAAGGCGCCCGCACACAGATCGACAGCGTGCTCGACCAGTACAACAACGGTCTGCTGACCGAGGGCGAGCGTCATAACAAGGTCATCGACATCTGGACGCAGGCGTCGAACGCGGTGGCGAACGAGCTGTTCGCGCGGCTCGAAGCGGCCTCGCGACGCGGCGAGATCAACCCGGTTTACGCGATGCTCGACTCCGGCGCGCGCGGCAGCAAGGACCAGATCCGCCAGCTGGCCGGTATGCGCGGTCTGATGGCGAAGCCGTCGGGCGACATCATCGAACGGCCGATCACCTCGAACTTCCGCGAAGGTCTGTCGGTGCTCGAATACTTCATTTCGACCCACGGCGCCCGCAAGGGTCTGGCCGACACCGCGCTCAAAACCGCGGACTCGGGTTACATGACCCGCCGTCTCGTCGACGTTGCGCAGGACATCATCTGCCGCGAGCAGGACTGCGGGACCACGAAGGGCGTCTGGACCAGCGCGATCATCGAAGGCGACGAGGTGATCCTGCCGCTGAAGGACCGCATCCTCGGCCGGTTCAGTGCGCAGGACATCCGCGATCCCGCTTATGCCGACGGCCGCCTGATCATTTCGGCCGGAGAAGAGTTCACGCCCGAGATCGTCGAGCTCATCGATAAGCGCGGCATCCAGCGCGTGCTGATCCGCTCGACCCTGACCTGCGAGACGCTGCGCGGCGTCTGCGTGAAGTGCTACGGCCGGAACCTGGCCAGCGACCGGCAGGCGAAGGAAGGCGACGCGCTCGGCATCATCGCCGCCCAGTCGATCGGCGAGCCGGGCACGCAGCTGACCATGCGTACGTTCCATATCGGCGGCACCGCTTCGAGCGCGTACAAGCAGCCGGTGATCGCGTCGCGTCATGACGGCGTCATCAAGCTGTTCAATGTGCGCACGATCAAGAACCAGAAGGGCAAGACGGTCGTCGTCAACAAGAACGGCTATGTGATCGTCTACGATCCGAATGTGGCGAAGGAGGCCGAGAAGACGGCCCGCGAACGGGCCCAGATCGAGGCGGAAGCGCTCGGTACGGTCTACAACAAGGATTACGACTTCTGGGGAGATGCGCTGAAGGAGGCCGAGCTCGACCGCTATGAGCTCGAAGCCGGTTCGGTGATCGACAAGAACGACGGCGACAGCGTGAAGGCCAACGAGGTGTTCGTGCAGTGGGAGGCGAACCACGTGCCGATCATCATCGAAGAGGCCGGTGTGGTTGAGCTGCACGACCTCGTGGAGGGCGTGACGCTGCAGAAGCAGAAGCGCGGCGGTTCCGATCAGGCCACGGTCATGGAACACCGCGAGGACCTGCACCCGCAGATCGTCATCAATTCGCCGGACGGGCAGTTCCTCGCGAACTATCCGCTGCCGGCCGGCGCAGTGCTGATGACCAAGCCGGGCGCGAAGGTCACCCCGGGCATGGTCGTGGCGCGCGTTCCGCGGCAGTCGGCCAAGAACAAGGACATCACCGGCGGTCTGCCGCGCATCGCGGAGCTGTTCGAAGCGCGTGTGCCGAAGGACGTGGCGGAGATTGCCCGCATCGACGGTTATATCGAGGTCGACAAGATGACCCGCGGCAAGCGCCAGCTGCTGATCCGCGATCCGGAGTCCGGCATGACCGAGGAGCACAACAACATTCCGCCGCACAAGCATCTGACCGTGAGCAAGGGCGACTTCGTCCGCAAGGGTCAGAAGCTGACGGAAGGTTCGATCGTTCCGCACACGCTGCTCGAAGTCTGCGGCATCCATGAGCTCCAGCGGCACCTGGTCGATGCGATTCAGCTCGTCTACCGTGCGCAGGGCGTCGAAATCAACGACAAGCACGTTGAAATCATCATCCGGCAGATGATGCAGAAGGTCCGGATCACCGAATCCGGGTCGACCGACTATCTGCCGGGCGAGCAGCTCGACCGCACTGAATTCGACCGGGTCAACCGTGAGATGATCGAGAAGGGCGGCAAGCCGGCGGAAGCCGAGCCGATCCTGCTCGGCATCACGAAAGCGGCCCTCGAAACCGAAAGCTTCATCTCGGCGGCGTCGTTCCAGGATACCACCCGTATTCTGACTGAGGCGGCGACGGTCGGCAAGGTGGACAACCTGAACGGCTTCAAGGAAAATGTGATCACGGGCCATCTGATTCCGGCCGGTACCGGCACGGAGATCATGCAGTCGATCCGGCTCAAATATCTCGGCACCGAGATCGAGCCGGAGCTGCCGGTGCGCGAGAGCGAGCGTTCGGTCGAGGAGATCGCGGCGGCCTGGCGGGAATCCGAGAACAAGAGCGATGCCGCCATCTTCGGAGACGAGGAGGAGGATTCGCTGCCGGACGAGGCGAAGGAGATGGTCGCCGAATTCGACGACGACGCGTTTGCCGATCTGGATGACGCCGAGCTCGACGATGCCGGGTTTGACGACGAAAACGAGTAA
PROTEIN sequence
Length: 1466
LIDNTYAYRELLGKSSASSFGAVSINVASPEVIRSWSFGEVKNPETINYRSFKPEKGGLFCERIFGPTRDWECNCGKYKRVKHKGIVCDRCGVEVTQAKVRRERMGHIELAVPVSHIWFFKCMPSRIGLVLDMTAKSLEHVIYYEEYVVTDPGDTPLKVGQTMNEIEYRQAVDDYGDAFMADMGAPAIKTLLERVDLPMLKAELEVSLEGTRNKAIRKKLAKRLRLVEGFMSSNSRPEWMILTVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKNLLQLRTPEVIIRNEKRMLQEAVDSLMDNGRHGRAVTGAGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIHQCGLPKKMAMILFEPFIIRHLKGRGFAHTVRGAKKMIERGEPEVWDILEEVTLGHPVMLNRAPTLHRLSIQAFDPVLIEGSAIRLHPLVCTAYNADFDGDQMAVHVPLSNEAQMETKLLMLAPNNIFSPANGKPIVSPTQDITLGSYYLTCEPRNKEKAKLYRDFFEVLYAMQCGFIKIHDAVRIPNPDYGKDTIYGDKESKFLLTTPGRCLFHEIWDTRLGFFNQIAKKKDLGRLISDSYNIAGHEATIKLLDDLKDLGYRHATLAGLSISIADLQVPDKKEEIIEGARTQIDSVLDQYNNGLLTEGERHNKVIDIWTQASNAVANELFARLEAASRRGEINPVYAMLDSGARGSKDQIRQLAGMRGLMAKPSGDIIERPITSNFREGLSVLEYFISTHGARKGLADTALKTADSGYMTRRLVDVAQDIICREQDCGTTKGVWTSAIIEGDEVILPLKDRILGRFSAQDIRDPAYADGRLIISAGEEFTPEIVELIDKRGIQRVLIRSTLTCETLRGVCVKCYGRNLASDRQAKEGDALGIIAAQSIGEPGTQLTMRTFHIGGTASSAYKQPVIASRHDGVIKLFNVRTIKNQKGKTVVVNKNGYVIVYDPNVAKEAEKTARERAQIEAEALGTVYNKDYDFWGDALKEAELDRYELEAGSVIDKNDGDSVKANEVFVQWEANHVPIIIEEAGVVELHDLVEGVTLQKQKRGGSDQATVMEHREDLHPQIVINSPDGQFLANYPLPAGAVLMTKPGAKVTPGMVVARVPRQSAKNKDITGGLPRIAELFEARVPKDVAEIARIDGYIEVDKMTRGKRQLLIRDPESGMTEEHNNIPPHKHLTVSKGDFVRKGQKLTEGSIVPHTLLEVCGIHELQRHLVDAIQLVYRAQGVEINDKHVEIIIRQMMQKVRITESGSTDYLPGEQLDRTEFDRVNREMIEKGGKPAEAEPILLGITKAALETESFISAASFQDTTRILTEAATVGKVDNLNGFKENVITGHLIPAGTGTEIMQSIRLKYLGTEIEPELPVRESERSVEEIAAAWRESENKSDAAIFGDEEEDSLPDEAKEMVAEFDDDAFADLDDAELDDAGFDDENE*