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L3_106_000M1_scaffold_1739_1

Organism: dasL3_106_000M1_metabat_metabat_47_fa_fa

near complete RP 45 / 55 BSCG 49 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(1..3195)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 1067.0
  • Bit_score: 1609
  • Evalue 0.0
mfd; Transcription-repair-coupling factor (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 1076.0
  • Bit_score: 1301
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003812FF8 similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 1067.0
  • Bit_score: 1617
  • Evalue 0.0

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Taxonomy

Clostridium sp. MSTE9 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3195
ATGAAATTTCTTTGCAACACCTTAAACCGCTTAAAAGAATTTCAAACATTGGACAATGCCGTCCAAACCGGGCGGCTTCCCGCCGCGGTCAACGGCTTATCCGGCGTGCACAAGGCGGCCTTTATCTACACGCTCTGCGCCAACCAGCATCGCAAGGCGTTCATCCTTGCCGGGGACGAGAGCGAAGGGCAGCGCCTTTGCGACGACCTCTCCGCCATGGGGATGCACCCGCTGGTTGTCCCCATGCGTGATTTCACCTTCCGCGACGCGGAGGGCGCTTCCCATGAATACGAACATCAGCGCCTACAGGCCCTAGCGCGCATCCTGAACGGCGAGTGCGACGCGGTGATCGCCTGCCTGGACGCGGCCCTGCAATATACGATCCCGCCGGAGGAGCTGCGCAAGCGCACCATCACGATCTCCGCCGGGCAGAGCATCCCCATGGAAGAGGTGGTCTCCGCCCTGGTCGCCTGCGGCTATGAGCGCGCCGCGCAGATCGACGGCACCGGGCAATTCTCCCAGCGCGGCGGCATCCTGGACATCTTCACGCCGGACGCCGCCAATCCCGTACGCCTGGAATACTGGGGCGACGAGATTGACACGCTCTCCCTGTTTGACTTGGAGACGCAGCGCCGCACGGAATCCATCGAGAAGCTGACCCTTGCGCCCGCCGTGGAGGCGTTGGTCGACGACCCGCAGGTGCTCGCCAAAAAGATCGAAAAACTGGCCTCCTCGCTGCGCGGAAAGGCTGCGCCCAAGGCCAAGGAGATTTTGCGTGCACAGGCGGAAAAGCTGGAACAGGGCGTCCATCTGGGCTGTGCGGACAAATTCTTCCCCCTACTGTATGGGCGCATCGCCACGCTGTTCGACTACCGGACGGACGACATGCTCCTGTTTGTCAGCGAGGGGACCAAGGTCAAGGACCGCGCCCGCAGCACTGCCTTCCAATGGGGCGAGGACCTCAAGGATTATTTGGAGGAGGGCGTCCTCTGCCGTGGGCTGGACACCTACAGCGCCGATTGGACCTACGCGGTGGGGCAATTTTCGCACGATACGGTCTATCTGGATACCTTTGCGCGCGGCAGTTACGACACGCCCATCCGCACGCTCATCGGCGTAACCGCGCGCCAGCTCTCTGTGTGGGGCGGCAGCACGCAGCTCCTGGAAGAGGACCTGCGGAACATGCTCCACAACAAGTGGTCCTGCGTGGTATTGGCCGGAAACGAACGGAGCGCACGCACCGTTGCGGCGGACCTGCAAGCCGCCGGCCTGCCCGCGGACTACCTGGAAAACCCGCAGACCATTCAGCGCGGCACGGTCGTCGTGACCGCCGGCGCGCTCTCCGCCGGCATGGAATTCCCCGGCGCCTTTTTCGGGCTGATTACCCATGGCCGCCTGCTCACCACCAAACAGCGCAAGCCCAAGCGCGCCAAAAACAGCCAGGAGATCTACAGCATCGCGGAATTGCAGCCGGGCGACTATATTGTACACGCTTCGCACGGCATCGGCGTGTTCGAGGGAATCCACAAAATCGACATGCACGGGGTTGTCAAGGATTACATCAAGCTCAAATACGCCAAGGGCGATACGCTCTATGTCCCGGTCACTCAGCTGGACATGGTCTCCAAATACATTGGGCCGCGCGAAGACGCCAACATCAAGCTGAACCGGCTGGGCGGCACCGAGTGGCAAAAGACCAAGGCCCGCGTGCGCACCGCCGTGAAGGACATGGCGAAGGAGCTCATCAAGCTCTATGCCGACCGGATGCAGGCCAAGGGGCACGCTTTTTCCGAGGACAATGAATGGCAGCGCGACTTTGAATCCCATTTTGAATTCGACGAGACGGAGGACCAGCTCCGCTGCATCGATGAGATCAAAAACGATATGGAACGGGAAGCGCCCATGGACAGGCTGCTCTGCGGCGATGTGGGCTTCGGCAAGACGGAAGTCGCCCTGCGCGCCGCCTTCAAATGCGTGTGCGACTCCAAGCAGTGCGCGTTGCTGGTGCCCACCACGATCCTGGCCTGGCAGCACTACCAGACGGTGACGCGCCGGATGGAGGGCTTCCCGGTCCGCGTGGAGTTGCTCTCCCGCTTCCGCACGCCGAAGCAGCAGGAAGAAATTATCCGCAAGCTCAAGCGCGGGGAAGTGGATATGATCGTCGGCACCCACCGCCTGGTCAGCAAGGACGTCAAATTCAAGGACCTCGGCCTGGTCATCATCGATGAGGAGCAGCGGTTCGGCGTGGCGCAGAAGGAAAAACTGAAGTCCCTCTGCAACAATGTGGACGTATTGACCCTGTCCGCAACGCCCATCCCCCGCACCTTAAATATGGCGTTGTCCGGCATCCGCGACATGAGCGTGATCGAGGAGGCGCCGCACGACCGCCATCCGGTGCAGACCTATGTGCTGGAACACGACAACGCGGTCATCAACGAGGCCATCCGCCGGGAACTGCGGCGCGGCGGCCAGGTCTACTACCTGCACAACGACGTGGCGTCCATCGAGCGCACCGCCGCGCGCATCCAGGCGCAGATTCCGGAGGCGCGCGTCGGGTTCGGCCACGGCAAGATGGCGGAGCACGAGCTCTCCGAGGTCTGGCGGAAGCTCCTGGAGCACGAAATCGACGTGCTGGTATGCACCACCATCATCGAAACCGGCGTGGACGTGCCGAACGCCAACACGCTCATCATCGAGAACGCGGACCGCATGGGCCTCTCGCAGCTACACCAGCTCCGCGGGCGTGTGGGCCGTTCCGCACGGCGCGCCTATGCCTATTTGACATTCACGCCGAACAAGGTGCTCTCCGAGATCTCCCAGAAGCGGCTGTCCGCGATCCGGGAATTCACCGAATTCGGGTCCGGGTTTAAGATTGCAATGCGCGACCTCGAGATCCGAGGCGCGGGGAACATCCTGGGCGGCGAACAGCATGGCCATATGGAGACCGTGGGCTACGACATGTACCTGCGCTTGCTCAGCGAGGCGATCCGCCGCGAGAAGGGCGAAGAAGTGCAGGAATACGGCCAGGAATGCCTGGTGGATATGCAGATTCAGGCGCACATCCCGGACAGATACATCGAGAATCTCAGCCAGCGGCTGGAAATTTACCGCCGCATTGCAGACATCCGTACCCGCGAGGACGCGCTGGACGTGACCGACGAACTGATCGACCGCTTCGGCGAGCCGCCGGAGAGC
PROTEIN sequence
Length: 1065
MKFLCNTLNRLKEFQTLDNAVQTGRLPAAVNGLSGVHKAAFIYTLCANQHRKAFILAGDESEGQRLCDDLSAMGMHPLVVPMRDFTFRDAEGASHEYEHQRLQALARILNGECDAVIACLDAALQYTIPPEELRKRTITISAGQSIPMEEVVSALVACGYERAAQIDGTGQFSQRGGILDIFTPDAANPVRLEYWGDEIDTLSLFDLETQRRTESIEKLTLAPAVEALVDDPQVLAKKIEKLASSLRGKAAPKAKEILRAQAEKLEQGVHLGCADKFFPLLYGRIATLFDYRTDDMLLFVSEGTKVKDRARSTAFQWGEDLKDYLEEGVLCRGLDTYSADWTYAVGQFSHDTVYLDTFARGSYDTPIRTLIGVTARQLSVWGGSTQLLEEDLRNMLHNKWSCVVLAGNERSARTVAADLQAAGLPADYLENPQTIQRGTVVVTAGALSAGMEFPGAFFGLITHGRLLTTKQRKPKRAKNSQEIYSIAELQPGDYIVHASHGIGVFEGIHKIDMHGVVKDYIKLKYAKGDTLYVPVTQLDMVSKYIGPREDANIKLNRLGGTEWQKTKARVRTAVKDMAKELIKLYADRMQAKGHAFSEDNEWQRDFESHFEFDETEDQLRCIDEIKNDMEREAPMDRLLCGDVGFGKTEVALRAAFKCVCDSKQCALLVPTTILAWQHYQTVTRRMEGFPVRVELLSRFRTPKQQEEIIRKLKRGEVDMIVGTHRLVSKDVKFKDLGLVIIDEEQRFGVAQKEKLKSLCNNVDVLTLSATPIPRTLNMALSGIRDMSVIEEAPHDRHPVQTYVLEHDNAVINEAIRRELRRGGQVYYLHNDVASIERTAARIQAQIPEARVGFGHGKMAEHELSEVWRKLLEHEIDVLVCTTIIETGVDVPNANTLIIENADRMGLSQLHQLRGRVGRSARRAYAYLTFTPNKVLSEISQKRLSAIREFTEFGSGFKIAMRDLEIRGAGNILGGEQHGHMETVGYDMYLRLLSEAIRREKGEEVQEYGQECLVDMQIQAHIPDRYIENLSQRLEIYRRIADIRTREDALDVTDELIDRFGEPPES